RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TPCN2Q8NHX9 752 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 LMO3Q8TAP4 145 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 PARD3BQ8TEW8 1205 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 CASKIN2Q8WXE0 1202 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 ZNF536O15090 1300 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 DNM1LO00429 736 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 PRELPP51888 382 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 KCNV2Q8TDN2 545 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 ZCWPW1Q9H0M4 648 aa16.84■□□□□ 0.29
PTBP1-204ENST00000394601 ANXA13P27216 316 aa16.83■□□□□ 0.29
PTBP1-204ENST00000394601 ALKBH5Q6P6C2 394 aaKnown RBP16.83■□□□□ 0.29
PTBP1-204ENST00000394601 EPN3Q9H201 632 aa16.83■□□□□ 0.29
PTBP1-204ENST00000394601 COL20A1Q9P218 1284 aa16.83■□□□□ 0.29
PTBP1-204ENST00000394601 ZNF70Q9UC06 446 aaPredicted RBP16.83■□□□□ 0.29
PTBP1-204ENST00000394601 PCDHB13Q9Y5F0 798 aa16.83■□□□□ 0.29
PTBP1-204ENST00000394601 MUTP22033 750 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 EPS15P42566 896 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 CCDC174Q6PII3 467 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 FMNL3Q8IVF7 1028 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 MDM1Q8TC05 714 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 NSMCE1Q8WV22 266 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 FAM151AQ8WW52 585 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 RSRC1Q96IZ7 334 aaKnown RBP16.83■□□□□ 0.28
PTBP1-204ENST00000394601 CLRN2A0PK11 232 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 F8VZ95 297 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 CHMP2AO43633 222 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 TBCAO75347 108 aaKnown RBP16.83■□□□□ 0.28
PTBP1-204ENST00000394601 RPL13P26373 211 aaKnown RBP16.83■□□□□ 0.28
PTBP1-204ENST00000394601 PTGISQ16647 500 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 PREPLQ4J6C6 727 aaPredicted RBP16.83■□□□□ 0.28
PTBP1-204ENST00000394601 TMEM174Q8WUU8 243 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 CYFIP2Q96F07 1278 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 VCPKMTQ9H867 229 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 PARVGQ9HBI0 331 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 AGPAT3Q9NRZ7 376 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 FBXO28Q9NVF7 368 aa16.83■□□□□ 0.28
PTBP1-204ENST00000394601 RPTORQ8N122 1335 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 A0A0A6YYK5 440 aaPredicted RBP16.82■□□□□ 0.28
PTBP1-204ENST00000394601 GCOM1H8Y6P7 765 aaPredicted RBP16.82■□□□□ 0.28
PTBP1-204ENST00000394601 DHX15O43143 795 aaKnown RBP16.82■□□□□ 0.28
PTBP1-204ENST00000394601 RAD51CO43502 376 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 POLR2MP0CAP2 368 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 ITGB5P18084 799 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 ZNF76P36508 570 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 MAP3K10Q02779 954 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 RSBN1LQ6PCB5 846 aaPredicted RBP16.82■□□□□ 0.28
PTBP1-204ENST00000394601 FUKQ8N0W3 1084 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 MREGQ8N565 214 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 MYCT1Q8N699 235 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 ACTRT1Q8TDG2 376 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 MKNK1Q9BUB5 465 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 CPSF2Q9P2I0 782 aaKnown RBP16.82■□□□□ 0.28
PTBP1-204ENST00000394601 PLAAQ9Y263 795 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 PARP14Q460N5 1801 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 ZNF233A6NK53 670 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 PTGER2P43116 358 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 FMO5P49326 533 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 HSD17B4P51659 736 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 RASGEF1CQ8N431 466 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 CNKSR1Q969H4 720 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 LUC7LQ9NQ29 371 aaKnown RBP16.82■□□□□ 0.28
PTBP1-204ENST00000394601 WDR81Q562E7 1941 aa16.82■□□□□ 0.28
PTBP1-204ENST00000394601 EVI5O60447 810 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 PSMC2P35998 433 aaKnown RBP16.81■□□□□ 0.28
PTBP1-204ENST00000394601 SPAG5Q96R06 1193 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 ARHGEF10LQ9HCE6 1279 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 IRAK4Q9NWZ3 460 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 UBE4BO95155 1302 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 IGSF9BQ9UPX0 1349 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 TBC1D12O60347 775 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 IFNAR2P48551 515 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 MCCD1P59942 119 aaPredicted RBP16.81■□□□□ 0.28
PTBP1-204ENST00000394601 FAM186BQ8IYM0 893 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 METTL13Q8N6R0 699 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 SELENOSQ9BQE4 189 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 ZNFX1Q9P2E3 1918 aaKnown RBP16.81■□□□□ 0.28
PTBP1-204ENST00000394601 FSBPO95073 299 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 THEMIS2Q5TEJ8 643 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 ALS2CLQ60I27 953 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 NT5DC3Q86UY8 548 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 HES6Q96HZ4 224 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 KCND2Q9NZV8 630 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 INTUQ9ULD6 942 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 G3BP2Q9UN86 482 aaKnown RBP16.81■□□□□ 0.28
PTBP1-204ENST00000394601 NOVA2Q9UNW9 492 aaKnown RBP16.81■□□□□ 0.28
PTBP1-204ENST00000394601 CD2APQ9Y5K6 639 aa16.81■□□□□ 0.28
PTBP1-204ENST00000394601 IRF6O14896 467 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 CLSTN1O94985 981 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 ERVK-9P63128 1117 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 GHRHRQ02643 423 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 SPP2Q13103 211 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 GNPTABQ3T906 1256 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 FAM228AQ86W67 206 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 SLC9A9Q8IVB4 645 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 ZBED3Q96IU2 234 aaPredicted RBP16.8■□□□□ 0.28
PTBP1-204ENST00000394601 STK33Q9BYT3 514 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 OSBPL7Q9BZF2 842 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms