RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 C19orf60Q96EN9 201 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SLC10A4Q96EP9 437 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 OTUD5Q96G74 571 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 MNTQ99583 582 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SARS2Q9NP81 518 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 BATF3Q9NR55 127 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 KCTD5Q9NXV2 234 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SUN2Q9UH99 717 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 RCOR1Q9UKL0 485 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SNX24Q9Y343 169 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 AIM2O14862 343 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 NARSO43776 548 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 BNIP3LO60238 219 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 LPXNO60711 386 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 CYP2C19P33261 490 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 KPNA1P52294 538 aaPredicted RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 ARPC4P59998 168 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 RHAGQ02094 409 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 TRAF2Q12933 501 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 PDAP1Q13442 181 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 NEDD8Q15843 81 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SLFNL1Q499Z3 407 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 ESCO1Q5FWF5 840 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 DSTYKQ6XUX3 929 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 C11orf57Q6ZUT1 292 aaPredicted RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 LPCAT2Q7L5N7 544 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 BBS5Q8N3I7 341 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 FAM81AQ8TBF8 368 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 RIN2Q8WYP3 895 aaPredicted RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 ARHGEF1Q92888 912 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 OGDHLQ9ULD0 1010 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SNX13Q9Y5W8 968 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 ARPC4-TTLL3A0A0A6YYG9 625 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 FAM25EA8MYX2 175 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 CTIFO43310 598 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 JAK2O60674 1132 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 CCDC22O60826 627 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 N4BP1O75113 896 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 GAP43P17677 238 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 CYP7A1P22680 504 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SOX6P35712 828 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 POLA2Q14181 598 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SHROOM1Q2M3G4 852 aaPredicted RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 ZNF394Q53GI3 561 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 TMEM63BQ5T3F8 832 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 KHDRBS2Q5VWX1 349 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 C1orf94Q6P1W5 598 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 NSMFQ6X4W1 530 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 KRT26Q7Z3Y9 468 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 FCHSD1Q86WN1 690 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 CHSY1Q86X52 802 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SLC25A41Q8N5S1 370 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 OR2W6PQ8NHA6 318 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 ENKURQ8TC29 256 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SEPT1Q8WYJ6 367 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 CDHR1Q96JP9 859 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 CLIC6Q96NY7 704 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 SRPK1Q96SB4 655 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 MMS19Q96T76 1030 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 RIOK2Q9BVS4 552 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 RPRD1BQ9NQG5 326 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 HSPBP1Q9NZL4 362 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 RGL1Q9NZL6 768 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 HDAC6Q9UBN7 1215 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 ZNF112Q9UJU3 913 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 MID2Q9UJV3 735 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 TTC7AQ9ULT0 858 aaPredicted RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 EDARQ9UNE0 448 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 PHLPP2Q6ZVD8 1323 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 CFAP73A6NFT4 308 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 PRPF4O43172 522 aaKnown RBP eCLIP3.47□□□□□ -1.85
PHF3-202ENST00000393387 ADCY6O43306 1168 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 PSIP1O75475 530 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 USP1O94782 785 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 NSFP46459 744 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 STARP49675 285 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 YARSP54577 528 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 NR5A1Q13285 461 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 HECTD3Q5T447 861 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 THEMIS2Q5TEJ8 643 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 TRIQKQ629K1 86 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 ERICH5Q6P6B1 374 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 PACS1Q6VY07 963 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 FRA10AC1Q70Z53 315 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 IFNLR1Q8IU57 520 aaPredicted RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 SPIRE2Q8WWL2 714 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 PRCCQ92733 491 aaPredicted RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 TUBGCP2Q9BSJ2 902 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 TEX13BQ9BXU2 312 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 IARS2Q9NSE4 1012 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 HMG20BQ9P0W2 317 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 PA2G4Q9UQ80 394 aaKnown RBP3.47□□□□□ -1.85
PHF3-202ENST00000393387 NOD1Q9Y239 953 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 MAP3K2Q9Y2U5 619 aa3.47□□□□□ -1.85
PHF3-202ENST00000393387 KPNA4O00629 521 aaPredicted RBP3.46□□□□□ -1.86
PHF3-202ENST00000393387 RAD51BO15315 384 aa3.46□□□□□ -1.86
PHF3-202ENST00000393387 MAFKO60675 156 aa3.46□□□□□ -1.86
PHF3-202ENST00000393387 RTN3O95197 1032 aaPredicted RBP3.46□□□□□ -1.86
PHF3-202ENST00000393387 ANXA1P04083 346 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms