RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 STK39Q9UEW8 545 aa13.83□□□□□ -0.2
CTSC-202ENST00000393301 CCDC194A0A1B0GVG4 234 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 TMEM150BA6NC51 233 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 C2orf71A6NGG8 1288 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 HIDE1A8MVS5 230 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 CSPG5O95196 566 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 LYPLA2O95372 231 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 FGFR4P22455 802 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 BCAR1P56945 870 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 ZXDAP98168 799 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 GIT2Q14161 759 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 SMC1AQ14683 1233 aaKnown RBP13.82□□□□□ -0.2
CTSC-202ENST00000393301 LETM2Q2VYF4 491 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 PLPP4Q5VZY2 271 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 TRIM67Q6ZTA4 783 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 MRPL10Q7Z7H8 261 aaKnown RBP13.82□□□□□ -0.2
CTSC-202ENST00000393301 IFNLR1Q8IU57 520 aaPredicted RBP13.82□□□□□ -0.2
CTSC-202ENST00000393301 HELQQ8TDG4 1101 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 WASF1Q92558 559 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 CASP10Q92851 521 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 SCLT1Q96NL6 688 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 ZBP1Q9H171 429 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 ENTPD7Q9NQZ7 604 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 FAM105AQ9NUU6 356 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 WRAP73Q9P2S5 460 aaPredicted RBP13.82□□□□□ -0.2
CTSC-202ENST00000393301 KCNJ14Q9UNX9 436 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
CTSC-202ENST00000393301 DDX11L8A8MPP1 907 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 ASAP2O43150 1006 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 HMGN5P82970 282 aaKnown RBP13.81□□□□□ -0.2
CTSC-202ENST00000393301 RBM10P98175 930 aaKnown RBP13.81□□□□□ -0.2
CTSC-202ENST00000393301 ITIH3Q06033 890 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 STK3Q13188 491 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 TMC7Q7Z402 723 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 DDX53Q86TM3 631 aaKnown RBP13.81□□□□□ -0.2
CTSC-202ENST00000393301 RHPN2Q8IUC4 686 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 SLFN12Q8IYM2 578 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 SLC7A3Q8WY07 619 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
CTSC-202ENST00000393301 NECTIN4Q96NY8 510 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 TBC1D13Q9NVG8 400 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 PIN4Q9Y237 131 aaKnown RBP13.81□□□□□ -0.2
CTSC-202ENST00000393301 HCFC2Q9Y5Z7 792 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 CNTNAP2Q9UHC6 1331 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 ZMYM2Q9UBW7 1377 aa13.81□□□□□ -0.2
CTSC-202ENST00000393301 USP34Q70CQ2 3546 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 CSDE1O75534 798 aaKnown RBP13.8□□□□□ -0.2
CTSC-202ENST00000393301 OFD1O75665 1012 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 GALTP07902 379 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 CTSAP10619 480 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
CTSC-202ENST00000393301 IBSPP21815 317 aaPredicted RBP13.8□□□□□ -0.2
CTSC-202ENST00000393301 PBX3P40426 434 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 TECP42680 631 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 ALDH7A1P49419 539 aaKnown RBP13.8□□□□□ -0.2
CTSC-202ENST00000393301 SIGLEC14Q08ET2 396 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 TPRNQ4KMQ1 711 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 NOMO2Q5JPE7 1267 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 PLA2G4FQ68DD2 849 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 TWF2Q6IBS0 349 aaKnown RBP13.8□□□□□ -0.2
CTSC-202ENST00000393301 GLB1LQ6UWU2 654 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 CATSPER4Q7RTX7 472 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 TMEM173Q86WV6 379 aaPredicted RBP13.8□□□□□ -0.2
CTSC-202ENST00000393301 NSUN7Q8NE18 718 aaKnown RBP13.8□□□□□ -0.2
CTSC-202ENST00000393301 OXER1Q8TDS5 423 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
CTSC-202ENST00000393301 TMEM169Q96HH4 297 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 IGSF21Q96ID5 467 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 LXNQ9BS40 222 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 ADAM7Q9H2U9 754 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 ZSWIM4Q9H7M6 989 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 DZANK1Q9NVP4 752 aa13.8□□□□□ -0.2
CTSC-202ENST00000393301 TMEM221A6NGB7 291 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 M0R296 226 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 CLASP2O75122 1294 aaKnown RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 PAPLNO95428 1278 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 EFEMP2O95967 443 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 AXLP30530 894 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 HOXA11P31270 313 aaPredicted RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 YWHABP31946 246 aaKnown RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 NPEPPSP55786 919 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 NHLH1Q02575 133 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 CUL4AQ13619 759 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 BMS1Q14692 1282 aaKnown RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 PTPN21Q16825 1174 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 EARS2Q5JPH6 523 aaKnown RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 UBXN11Q5T124 520 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 AGMOQ6ZNB7 445 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 PIK3AP1Q6ZUJ8 805 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 POTEDQ86YR6 584 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 CNNM3Q8NE01 707 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 TCP11Q8WWU5 503 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 PGBD4Q96DM1 585 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 ASIC4Q96FT7 647 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 INTS4Q96HW7 963 aaKnown RBP13.79□□□□□ -0.2
CTSC-202ENST00000393301 CEP170P1Q96L14 293 aa13.79□□□□□ -0.2
CTSC-202ENST00000393301 FBXL18Q96ME1 805 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms