RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 STK33Q9BYT3 514 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 PUS3Q9BZE2 481 aaKnown RBP8.15□□□□□ -1.11
VTI1A-201ENST00000393077 CAPN11Q9UMQ6 739 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 PACSIN2Q9UNF0 486 aaPredicted RBP8.15□□□□□ -1.11
VTI1A-201ENST00000393077 STX8Q9UNK0 236 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 SSX2IPQ9Y2D8 614 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 TNS3Q68CZ2 1445 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 TMEM120BA0PK00 339 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 E7EWF7 191 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 C6orf229H3BNL8 230 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ATICP31939 592 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 FOXD4Q12950 439 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 BNIP1Q12981 228 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 TMEM67Q5HYA8 995 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 EPHA10Q5JZY3 1008 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ATP8B4Q8TF62 1192 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ANKRD36BP1Q96IX9 119 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 GDF3Q9NR23 364 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 VPS54Q9P1Q0 977 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ASIC3Q9UHC3 531 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 RWDD2AQ9UIY3 292 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 CCNL1Q9UK58 526 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 DBR1Q9UK59 544 aaKnown RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ZMYND8Q9ULU4 1186 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 SNX24Q9Y343 169 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 CAPN6Q9Y6Q1 641 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ATP10DQ9P241 1426 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 A0A0G2JND7 137 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 LGALS16A8MUM7 142 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 GAS8O95995 478 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 TNFRSF8P28908 595 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 LSAMPQ13449 338 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 GJC2Q5T442 439 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 C11orf74Q86VG3 221 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 FAM13CQ8NE31 585 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 TBC1D10AQ9BXI6 508 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 PLGRKTQ9HBL7 147 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 AASDHPPTQ9NRN7 309 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 NKX1-2Q9UD57 310 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 CNOT8Q9UFF9 292 aaKnown RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 MOSPD1Q9UJG1 213 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 DCTN4Q9UJW0 460 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 LOC102724428A0A0B4J2F2 783 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 A0A0J9YVX5 310 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 FAM170AA1A519 330 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 TTLL13PA6NNM8 815 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 NBPF26B4DH59 902 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 THAP12O43422 761 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 RANBP6O60518 1105 aaKnown RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 CAPN1P07384 714 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 STIP1P31948 543 aaKnown RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 SIK1P57059 783 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ASIC1P78348 528 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 KRT80Q6KB66 452 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 RBM44Q6ZP01 1051 aaKnown RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 NUDCD3Q8IVD9 361 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 NOSTRINQ8IVI9 506 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 SRRM1Q8IYB3 904 aaKnown RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 SYCE1Q8N0S2 351 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 PPP1R14CQ8TAE6 165 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 OXCT2Q9BYC2 517 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 BHMT2Q9H2M3 363 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ARHGEF3Q9NR81 526 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ATAD3AQ9NVI7 634 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 PTTG2Q9NZH5 202 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 SLC12A6Q9UHW9 1150 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 MROH7-TTC4A0A0A0MT08 1334 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 COL3A1P02461 1466 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 GOLGA8CPA6NN73 597 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 GIPC1O14908 333 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ADCY6O43306 1168 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ACSL3O95573 720 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 LDHCP07864 332 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 KRT5P13647 590 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 PORP16435 677 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 CDH3P22223 829 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 PTPN4P29074 926 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 CASP1P29466 404 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ALDH1B1P30837 517 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 POLGP54098 1239 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 KRT76Q01546 638 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 TNIP1Q15025 636 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 PARP6Q2NL67 630 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 RABGAP1LQ5R372 815 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 MIGA1Q8NAN2 632 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 RILPQ96NA2 401 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 MRPL1Q9BYD6 325 aaKnown RBP8.14□□□□□ -1.11
VTI1A-201ENST00000393077 HOMER2Q9NSB8 354 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 ZNF212Q9UDV6 495 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 AMFRQ9UKV5 643 aa8.14□□□□□ -1.11
VTI1A-201ENST00000393077 NPHP3-ACAD11A0A0J9YXS1 232 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 NOTOA8MTQ0 251 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 IDO1P14902 403 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 TKTP29401 623 aaKnown RBP8.13□□□□□ -1.11
VTI1A-201ENST00000393077 DR1Q01658 176 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 VWA3BQ502W6 1294 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 RSPH3Q86UC2 560 aa8.13□□□□□ -1.11
VTI1A-201ENST00000393077 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms