RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 KCNN1Q92952 543 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 OPTNQ96CV9 577 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 ALS2CR12Q96Q35 445 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 PAGR1Q9BTK6 254 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 JRKLQ9Y4A0 524 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 IGKV6D-21A0A0A0MT36 114 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 PMM2O15305 246 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 TRIM49P0CI25 452 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 TRIM49CP0CI26 452 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 FERP16591 822 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 OSBPP22059 807 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 VAMP7P51809 220 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 HUNKP57058 714 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 SP4Q02446 784 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 ARID5AQ03989 594 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 IQCEQ6IPM2 695 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 SEPT14Q6ZU15 432 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 STK33Q9BYT3 514 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 INTS2Q9H0H0 1204 aaKnown RBP21.86■■□□□ 1.09
PTPN11-202ENST00000392597 ZNF302Q9NR11 478 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 ARGLU1Q9NWB6 273 aaPredicted RBP21.86■■□□□ 1.09
PTPN11-202ENST00000392597 TELO2Q9Y4R8 837 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 TLL2Q9Y6L7 1015 aa21.86■■□□□ 1.09
PTPN11-202ENST00000392597 DENND3A2RUS2 1198 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 PEX10O60683 326 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 GFPT2O94808 682 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 ATP1A1P05023 1023 aaKnown RBP21.85■■□□□ 1.09
PTPN11-202ENST00000392597 STAT1P42224 750 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 CETN1Q12798 172 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 NEDD9Q14511 834 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 TEX35Q5T0J7 233 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 BSNDQ8WZ55 320 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 IFT74Q96LB3 600 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 PCIF1Q9H4Z3 704 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 XPNPEP1Q9NQW7 623 aa21.85■■□□□ 1.09
PTPN11-202ENST00000392597 A0A087X0T9 212 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 CTAGE15A4D2H0 777 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 TISP43B9A030 160 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 FAM228BP0C875 321 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 CTAGE8P0CG41 777 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 UBA1P22314 1058 aaKnown RBP21.84■■□□□ 1.09
PTPN11-202ENST00000392597 PTK2Q05397 1052 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 CTAGE6Q86UF2 777 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 GPIHBP1Q8IV16 184 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 CTAGE4Q8IX94 777 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 VTI1AQ96AJ9 217 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 NOX5Q96PH1 765 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 CCDC94Q9BW85 323 aaPredicted RBP21.84■■□□□ 1.09
PTPN11-202ENST00000392597 APEX2Q9UBZ4 518 aa21.84■■□□□ 1.09
PTPN11-202ENST00000392597 BTNL10A8MVZ5 291 aa21.83■■□□□ 1.09
PTPN11-202ENST00000392597 OATP04181 439 aa21.83■■□□□ 1.09
PTPN11-202ENST00000392597 APLP1P51693 650 aa21.83■■□□□ 1.09
PTPN11-202ENST00000392597 ZNF571Q7Z3V5 609 aaPredicted RBP21.83■■□□□ 1.09
PTPN11-202ENST00000392597 VPS36Q86VN1 386 aa21.83■■□□□ 1.09
PTPN11-202ENST00000392597 RDH13Q8NBN7 331 aa21.83■■□□□ 1.09
PTPN11-202ENST00000392597 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.83■■□□□ 1.09
PTPN11-202ENST00000392597 RBPJLQ9UBG7 517 aa21.83■■□□□ 1.09
PTPN11-202ENST00000392597 ADAMTS1Q9UHI8 967 aa21.83■■□□□ 1.09
PTPN11-202ENST00000392597 PUF60Q9UHX1 559 aaKnown RBP21.83■■□□□ 1.09
PTPN11-202ENST00000392597 CAPN6Q9Y6Q1 641 aa21.83■■□□□ 1.09
PTPN11-202ENST00000392597 ENC1O14682 589 aa21.83■■□□□ 1.08
PTPN11-202ENST00000392597 FARP2O94887 1054 aaPredicted RBP21.83■■□□□ 1.08
PTPN11-202ENST00000392597 PRLRP16471 622 aa21.83■■□□□ 1.08
PTPN11-202ENST00000392597 CNGA1P29973 690 aa21.83■■□□□ 1.08
PTPN11-202ENST00000392597 ENPEPQ07075 957 aa21.83■■□□□ 1.08
PTPN11-202ENST00000392597 SLC10A4Q96EP9 437 aa21.83■■□□□ 1.08
PTPN11-202ENST00000392597 NIFKQ9BYG3 293 aaKnown RBP21.83■■□□□ 1.08
PTPN11-202ENST00000392597 MLXIPQ9HAP2 919 aa21.83■■□□□ 1.08
PTPN11-202ENST00000392597 ARHGAP28Q9P2N2 729 aa21.83■■□□□ 1.08
PTPN11-202ENST00000392597 AJAP1Q9UKB5 411 aaPredicted RBP21.83■■□□□ 1.08
PTPN11-202ENST00000392597 USP20Q9Y2K6 914 aa21.83■■□□□ 1.08
PTPN11-202ENST00000392597 LOC102724159A0A0B4J2E5 919 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 F8VZ95 297 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 MOCS3O95396 460 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 CCDC172P0C7W6 258 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 ATP4AP20648 1035 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 SOX5P35711 763 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 CKAP4Q07065 602 aaKnown RBP21.82■■□□□ 1.08
PTPN11-202ENST00000392597 EMC2Q15006 297 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 PWP2Q15269 919 aaKnown RBP21.82■■□□□ 1.08
PTPN11-202ENST00000392597 NAB2Q15742 525 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 BRDTQ58F21 947 aaPredicted RBP21.82■■□□□ 1.08
PTPN11-202ENST00000392597 GPAT2Q6NUI2 795 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 KCNV1Q6PIU1 500 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 LMO3Q8TAP4 145 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 HHIPL1Q96JK4 782 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 RPGRIP1Q96KN7 1286 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 DNAJC12Q9UKB3 198 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 MYH10P35580 1976 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 EMSYQ7Z589 1322 aa21.82■■□□□ 1.08
PTPN11-202ENST00000392597 ADSSP30520 456 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 SNAPC2Q13487 334 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 METTL7BQ6UX53 244 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 GTF3C2Q8WUA4 911 aaPredicted RBP21.81■■□□□ 1.08
PTPN11-202ENST00000392597 FBXL18Q96ME1 805 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 POLR3FQ9H1D9 316 aaPredicted RBP21.81■■□□□ 1.08
PTPN11-202ENST00000392597 MROH8Q9H579 483 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 DHX33Q9H6R0 707 aaKnown RBP21.81■■□□□ 1.08
PTPN11-202ENST00000392597 TXNRD2Q9NNW7 524 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 CREBZFQ9NS37 354 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms