RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 POU3F3P20264 500 aaPredicted RBP24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 PCBP1Q15365 356 aaKnown RBP eCLIP24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 PAN2Q504Q3 1202 aaKnown RBP24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 EPC2Q52LR7 807 aa24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 CDCA2Q69YH5 1023 aaPredicted RBP24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 TWF2Q6IBS0 349 aaKnown RBP24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 USP49Q70CQ1 688 aa24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 TMEM192Q8IY95 271 aa24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 SYT2Q8N9I0 419 aaPredicted RBP24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 CDK5RAP3Q96JB5 506 aa24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 CCSER1Q9C0I3 900 aa24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 MRPL42Q9Y6G3 142 aaKnown RBP24.4■■□□□ 1.5
IGHV3-20-201ENST00000390606 LRRIQ4A6NIV6 560 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 TSPAN1O60635 241 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 EOMESO95936 686 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 SLC12A3P55017 1021 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 SPECC1Q5M775 1068 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 DAW1Q8N136 415 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 LINC00301Q8NCQ3 95 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 FBXO22Q8NEZ5 403 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 MAFAQ8NHW3 353 aaPredicted RBP24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 GDPD5Q8WTR4 605 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 KIFAP3Q92845 792 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 CLIC6Q96NY7 704 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 FAM105AQ9NUU6 356 aa24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 TFIP11Q9UBB9 837 aaKnown RBP24.39■■□□□ 1.49
IGHV3-20-201ENST00000390606 ZNF623O75123 536 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 ERLIN2O94905 339 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 PLA2G4BP0C869 781 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 IGFBP4P22692 258 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 NAMPTP43490 491 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 MAPK7Q13164 816 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 KARSQ15046 597 aaKnown RBP24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 UBXN11Q5T124 520 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 CALML4Q96GE6 196 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 EPSTI1Q96J88 318 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 ZNF396Q96N95 335 aaPredicted RBP24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 BLOC1S4Q9NUP1 217 aa24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 FNDC1Q4ZHG4 1894 aaPredicted RBP24.38■■□□□ 1.49
IGHV3-20-201ENST00000390606 TBKBP1A7MCY6 615 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 C5orf67F2Z3F1 127 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 HIP1RO75146 1068 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 PLCG1P19174 1290 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 GUCY2CP25092 1073 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 AXLP30530 894 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 BMPR1AP36894 532 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 PPP2R5AQ15172 486 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 CLLU1OSQ5K130 101 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 CASD1Q96PB1 797 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 TMEM117Q9H0C3 514 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 MTCH2Q9Y6C9 303 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 MYH15Q9Y2K3 1946 aa24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 COL4A4P53420 1690 aaPredicted RBP24.37■■□□□ 1.49
IGHV3-20-201ENST00000390606 B4GALT5O43286 388 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 HOXA2O43364 376 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 SSBP05455 408 aaKnown RBP eCLIP24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 SKIP12755 728 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 ARF4P18085 180 aaPredicted RBP24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 CTNNB1P35222 781 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 RAB27AP51159 221 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 PPP4R3CPQ6ZMV5 832 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 KRI1Q8N9T8 703 aaKnown RBP24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 RNF169Q8NCN4 708 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 SYMPKQ92797 1274 aaKnown RBP24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 CPB2Q96IY4 423 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 FZD8Q9H461 694 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 HCSTQ9UBK5 93 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 RWDD3Q9Y3V2 267 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 PCDHB2Q9Y5E7 798 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 RALGAPA2Q2PPJ7 1873 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 NLRC5Q86WI3 1866 aa24.36■■□□□ 1.49
IGHV3-20-201ENST00000390606 PRRC2BQ5JSZ5 2229 aaKnown RBP24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 COL6A3P12111 3177 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 H3BNC9 293 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 RB1P06400 928 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 STK38Q15208 465 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 FAM187BQ17R55 369 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 NOTUMQ6P988 496 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 MRPL10Q7Z7H8 261 aaKnown RBP24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 ZBTB8OSQ8IWT0 167 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 DEPTORQ8TB45 409 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 LPPQ93052 612 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 CCDC51Q96ER9 411 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 IFT74Q96LB3 600 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 KIFC3Q9BVG8 833 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 TIPINQ9BVW5 301 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 CCDC113Q9H0I3 377 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 C2orf40Q9H1Z8 148 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 PRMT7Q9NVM4 692 aaPredicted RBP24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 ZDHHC9Q9Y397 364 aa24.35■■□□□ 1.49
IGHV3-20-201ENST00000390606 MEIS3P2A8K0S8 358 aa24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 YEATS4O95619 227 aa24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 BRD1O95696 1058 aa24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 FOXD4L6Q3SYB3 417 aaPredicted RBP24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 ARSHQ5FYA8 562 aa24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 FOXD4L3Q6VB84 417 aaPredicted RBP24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 LRRC55Q6ZSA7 311 aa24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 PLVAPQ9BX97 442 aa24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 KCND2Q9NZV8 630 aa24.34■■□□□ 1.49
IGHV3-20-201ENST00000390606 TTLL13PA6NNM8 815 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms