RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 ARID3CA6NKF2 412 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 DIRC3C9JPN6 131 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 TLR3O15455 904 aaKnown RBP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 HLA-DOAP06340 250 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 PRG2P13727 222 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 SCP2P22307 547 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 EIF4BP23588 611 aaKnown RBP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 SERPINB4P48594 390 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 BPIFB4P59827 614 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 HTRA4P83105 476 aaPredicted RBP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 HOXA4Q00056 320 aaPredicted RBP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 IRF9Q00978 393 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 CD83Q01151 205 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 CLCQ05315 142 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 MOGSQ13724 837 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 SUPT20HL1Q3ZLR7 823 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 SNAP47Q5SQN1 464 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 PXDC1Q5TGL8 231 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 MEI1Q5TIA1 1274 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 SLC18B1Q6NT16 456 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 ARMC6Q6NXE6 501 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 PNPLA5Q7Z6Z6 429 aaPredicted RBP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 GPR149Q86SP6 731 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 RCBTB1Q8NDN9 531 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 UHMK1Q8TAS1 419 aaKnown RBP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 DIO2Q92813 273 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 TMEM74Q96NL1 305 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 HAUS7Q99871 368 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 BTBD2Q9BX70 525 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 C1QTNF5Q9BXJ0 243 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 TEX101Q9BY14 249 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 CPEB1Q9BZB8 566 aaKnown RBP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 CPNE5Q9HCH3 593 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 KCNQ5Q9NR82 932 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 CLDND1Q9NY35 253 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 RNF181Q9P0P0 153 aa0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 ZNF214Q9UL59 606 aaPredicted RBP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.57□□□□□ -2.32
TRAJ53-201ENST00000390485 SNED1Q8TER0 1413 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 ANTXRLA6NF34 631 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 F6X3S4 739 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 LEFTY2O00292 366 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 SLC28A2O43868 658 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 MAFO75444 373 aaPredicted RBP0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 PPM1BO75688 479 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 STC2O76061 302 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 CAPNS1P04632 268 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 SERPINB2P05120 415 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 T-ENOLP0DO92 83 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 ST13P50502 369 aaKnown RBP0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 SESN2P58004 480 aaPredicted RBP0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 FAM160A1Q05DH4 1040 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 FMR1Q06787 632 aaKnown RBP eCLIP0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 KCNAB2Q13303 367 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 SPIDRQ14159 915 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 ZNF585BQ52M93 769 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 GRAMD4Q6IC98 578 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 KLHDC10Q6PID8 442 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 ZNF66Q6ZN08 573 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 NRACQ8N912 160 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 FBXO41Q8TF61 875 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 SLITRK1Q96PX8 696 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 QTRT1Q9BXR0 403 aaKnown RBP0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 GBP3Q9H0R5 595 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 NCOA5Q9HCD5 579 aaKnown RBP0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 INCENPQ9NQS7 918 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 CYP26B1Q9NR63 512 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 TRMT13Q9NUP7 481 aaKnown RBP0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 FAM86C1Q9NVL1 165 aa0.56□□□□□ -2.32
TRAJ53-201ENST00000390485 GOLGA8BA8MQT2 603 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 PPP6CO00743 305 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 GREM1O60565 184 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 SOCS5O75159 536 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 FOSP01100 380 aaPredicted RBP0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 RHCEP18577 417 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 TCEA1P23193 301 aaKnown RBP0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 PTGS1P23219 599 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 RESTQ13127 1097 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 TCIRG1Q13488 830 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 LRRC41Q15345 812 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 SLC2A7Q6PXP3 512 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 OTOP3Q7RTS5 596 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 KIAA0825Q8IV33 1275 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 GCDHQ92947 438 aaPredicted RBP0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 NKD2Q969F2 451 aaPredicted RBP0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 RSRP1Q9BUV0 290 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 PRSS22Q9GZN4 317 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 OR10A5Q9H207 317 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 DNMT3BQ9UBC3 853 aaKnown RBP0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 MCM8Q9UJA3 840 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 RCAN3Q9UKA8 241 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 NUB1Q9Y5A7 615 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 PCDHA2Q9Y5H9 948 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 WNT6Q9Y6F9 365 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 SMAD5-AS1Q9Y6J3 95 aa0.55□□□□□ -2.32
TRAJ53-201ENST00000390485 LY6G6EA0A0G2JKS1 128 aa0.54□□□□□ -2.32
TRAJ53-201ENST00000390485 H2AFYO75367 372 aaKnown RBP0.54□□□□□ -2.32
TRAJ53-201ENST00000390485 CDKL5O76039 1030 aa0.54□□□□□ -2.32
TRAJ53-201ENST00000390485 SEC24DO94855 1032 aaPredicted RBP0.54□□□□□ -2.32
TRAJ53-201ENST00000390485 CAMTA2O94983 1202 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms