RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 SYCE2Q6PIF2 218 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 HFE2Q6ZVN8 426 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 PRPF31Q8WWY3 499 aaKnown RBP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 SLC7A3Q8WY07 619 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 WASF1Q92558 559 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 DYDC2Q96IM9 177 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 NAP1L4Q99733 375 aaKnown RBP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 MRPL9Q9BYD2 267 aaKnown RBP11.98□□□□□ -0.49
TRAV4-201ENST00000390426 S1PR5Q9H228 398 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 INPP5FQ9Y2H2 1132 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 COL4A3BPQ9Y5P4 624 aa11.98□□□□□ -0.49
TRAV4-201ENST00000390426 C2orf71A6NGG8 1288 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 ZBTB39O15060 712 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 TBX3O15119 743 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 ZC3H11AO75152 810 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRAV4-201ENST00000390426 OFD1O75665 1012 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 CXCL14O95715 111 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 SRGAP2BP0DMP2 458 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 SKIP12755 728 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 YWHABP31946 246 aaKnown RBP11.97□□□□□ -0.49
TRAV4-201ENST00000390426 KRT2P35908 639 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 RFC5P40937 340 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 ANAPC15P60006 121 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 CYP4A11Q02928 519 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 SMC1AQ14683 1233 aaKnown RBP11.97□□□□□ -0.49
TRAV4-201ENST00000390426 NOMO2Q5JPE7 1267 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 GLB1LQ6UWU2 654 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 TMEM184AQ6ZMB5 413 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 C4orf19Q8IY42 314 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 MRPL43Q8N983 215 aaKnown RBP11.97□□□□□ -0.49
TRAV4-201ENST00000390426 PSPC1Q8WXF1 523 aaKnown RBP11.97□□□□□ -0.49
TRAV4-201ENST00000390426 SUSD6Q92537 303 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 EDAQ92838 391 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 TMEM169Q96HH4 297 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 LXNQ9BS40 222 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 TRAIPQ9BWF2 469 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 GBP3Q9H0R5 595 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 DHX33Q9H6R0 707 aaKnown RBP11.97□□□□□ -0.49
TRAV4-201ENST00000390426 NRDE2Q9H7Z3 1164 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 IFT122Q9HBG6 1241 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
TRAV4-201ENST00000390426 ZNF623O75123 536 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 SP100P23497 879 aaPredicted RBP11.96□□□□□ -0.49
TRAV4-201ENST00000390426 RNASELQ05823 741 aaKnown RBP11.96□□□□□ -0.49
TRAV4-201ENST00000390426 LAMTOR4Q0VGL1 99 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 CBX2Q14781 532 aaPredicted RBP11.96□□□□□ -0.49
TRAV4-201ENST00000390426 ME3Q16798 604 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 XKR9Q5GH70 373 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 OTUD6AQ7L8S5 288 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 SRGAP1Q7Z6B7 1085 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 TMEM173Q86WV6 379 aaPredicted RBP11.96□□□□□ -0.49
TRAV4-201ENST00000390426 TPH2Q8IWU9 490 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 EXOC8Q8IYI6 725 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 VPS52Q8N1B4 723 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 BCL7CQ8WUZ0 217 aaPredicted RBP11.96□□□□□ -0.49
TRAV4-201ENST00000390426 AUTS2Q8WXX7 1259 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 TNFRSF25Q93038 417 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 PGBD4Q96DM1 585 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 ZSWIM4Q9H7M6 989 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 MINDY3Q9H8M7 445 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 BRMS1Q9HCU9 246 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 AGPAT5Q9NUQ2 364 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 TBC1D13Q9NVG8 400 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 DNAJB4Q9UDY4 337 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 CDH22Q9UJ99 828 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 PPME1Q9Y570 386 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 PCDHB2Q9Y5E7 798 aa11.96□□□□□ -0.49
TRAV4-201ENST00000390426 BTBD18B2RXH4 712 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 JAK2O60674 1132 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 CLASP2O75122 1294 aaKnown RBP11.95□□□□□ -0.5
TRAV4-201ENST00000390426 GALTP07902 379 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 HOXB8P17481 243 aaPredicted RBP11.95□□□□□ -0.5
TRAV4-201ENST00000390426 SLC11A1P49279 550 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 RAB27AP51159 221 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 ZXDAP98168 799 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 SPIRE1Q08AE8 756 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 BMS1Q14692 1282 aaKnown RBP11.95□□□□□ -0.5
TRAV4-201ENST00000390426 EMC2Q15006 297 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 UBXN11Q5T124 520 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 AGMOQ6ZNB7 445 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 TRIM67Q6ZTA4 783 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 ZNF280BQ86YH2 543 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 SLFN12Q8IYM2 578 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
TRAV4-201ENST00000390426 TCP11Q8WWU5 503 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 CASP10Q92851 521 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 GTF3C6Q969F1 213 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 IGSF21Q96ID5 467 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 MFSD14AQ96MC6 490 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 MTRQ99707 1265 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 EIF2AK1Q9BQI3 630 aaKnown RBP11.95□□□□□ -0.5
TRAV4-201ENST00000390426 HCFC2Q9Y5Z7 792 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 MUC6Q6W4X9 2439 aa11.95□□□□□ -0.5
TRAV4-201ENST00000390426 A0A087WWV3 80 aa11.94□□□□□ -0.5
TRAV4-201ENST00000390426 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.94□□□□□ -0.5
TRAV4-201ENST00000390426 TMEM221A6NGB7 291 aa11.94□□□□□ -0.5
TRAV4-201ENST00000390426 M0R296 226 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms