RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 APBB1IPQ7Z5R6 666 aaPredicted RBP0.94□□□□□ -2.26
SNORD28-201ENST00000384706 CLEC14AQ86T13 490 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 ARHGEF25Q86VW2 580 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 XYLT1Q86Y38 959 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 NOSTRINQ8IVI9 506 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 ARHGEF19Q8IW93 802 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 LILRA3Q8N6C8 439 aaPredicted RBP0.94□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF366Q8N895 744 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 C2orf69Q8N8R5 385 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 SIMC1Q8NDZ2 872 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 CPEB3Q8NE35 698 aaKnown RBP0.94□□□□□ -2.26
SNORD28-201ENST00000384706 ST13P5Q8NFI4 369 aaPredicted RBP0.94□□□□□ -2.26
SNORD28-201ENST00000384706 OR5M3Q8NGP4 307 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 CAGE1Q8TC20 777 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF384Q8TF68 577 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 SCARB1Q8WTV0 552 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 SMG7Q92540 1137 aaKnown RBP0.94□□□□□ -2.26
SNORD28-201ENST00000384706 NELL1Q92832 810 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 NKD2Q969F2 451 aaPredicted RBP0.94□□□□□ -2.26
SNORD28-201ENST00000384706 E2F7Q96AV8 911 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 FOXRED1Q96CU9 486 aaPredicted RBP0.94□□□□□ -2.26
SNORD28-201ENST00000384706 MRRFQ96E11 262 aaKnown RBP0.94□□□□□ -2.26
SNORD28-201ENST00000384706 DYDC2Q96IM9 177 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 UIMC1Q96RL1 719 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 TUBGCP5Q96RT8 1024 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 FOXB1Q99853 325 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 LRFN3Q9BTN0 628 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 NDC1Q9BTX1 674 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 SPATA9Q9BWV2 254 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 HAPLN2Q9GZV7 340 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 PRDM13Q9H4Q3 707 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 SPON1Q9HCB6 807 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 KIAA1586Q9HCI6 787 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 AKIP1Q9NQ31 210 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 ING3Q9NXR8 418 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 RNF181Q9P0P0 153 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 PFDN2Q9UHV9 154 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 TLK1Q9UKI8 766 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 SYNPO2Q9UMS6 1093 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 HDAC5Q9UQL6 1122 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 FRMD4BQ9Y2L6 1034 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 B3GALT1Q9Y5Z6 326 aa0.94□□□□□ -2.26
SNORD28-201ENST00000384706 PIPSLA2A3N6 862 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 CCDC85CA6NKD9 419 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 TMEM200CA6NKL6 621 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 PRR5-ARHGAP8B1AHC4 643 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 LEFTY2O00292 366 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 TRIM24O15164 1050 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 KLF4O43474 513 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 DIAPH1O60610 1272 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 DNAJC6O75061 913 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 EFCAB14O75071 495 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 MAFO75444 373 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 APOL3O95236 402 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 MATN4O95460 622 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 CFBP00751 764 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 PRLP01236 227 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 IGLV2-14P01704 120 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 HLA-DOAP06340 250 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 C6orf222P0C671 652 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 ZBTB48P10074 688 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 ITGAMP11215 1152 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 HSP90B1P14625 803 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 ERCC5P28715 1186 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 SDHAP31040 664 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 MPLP40238 635 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 CASRP41180 1078 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 ZNF81P51508 661 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 KIF11P52732 1056 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 MFAP1P55081 439 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 RNASE9P60153 205 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 SUMO1P63165 101 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 GABREP78334 506 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 GUCY1B3Q02153 619 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 NHLH2Q02577 135 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 ARID5AQ03989 594 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 SRSF4Q08170 494 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 FOXF2Q12947 444 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 RESTQ13127 1097 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 TP53BP2Q13625 1128 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 VPS72Q15906 364 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 MTERF2Q49AM1 385 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 DCAF17Q5H9S7 520 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 TTC38Q5R3I4 469 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 SLFN12LQ6IEE8 588 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 CC2D1AQ6P1N0 951 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 OVCH1Q7RTY7 1134 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 BRAPQ7Z569 592 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 RTN4RL1Q86UN2 441 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 FAM83AQ86UY5 434 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 SLC44A3Q8N4M1 653 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 IGSF22Q8N9C0 903 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 ZBTB38Q8NAP3 1195 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 FAM98AQ8NCA5 519 aaKnown RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 GLB1L3Q8NCI6 653 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 OR5AN1Q8NGI8 311 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 DLG3Q92796 817 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 MAML3Q96JK9 1138 aa0.93□□□□□ -2.26
SNORD28-201ENST00000384706 MAGEB10Q96LZ2 347 aaPredicted RBP0.93□□□□□ -2.26
SNORD28-201ENST00000384706 COQ10AQ96MF6 247 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms