RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 EPN1Q9Y6I3 576 aaPredicted RBP11.46□□□□□ -0.58
CLCN4-202ENST00000380833 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 CUTAO60888 179 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 PPP1R37O75864 691 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 IFNL3Q8IZI9 196 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 NAF1Q96HR8 494 aaKnown RBP11.45□□□□□ -0.58
CLCN4-202ENST00000380833 PUS3Q9BZE2 481 aaKnown RBP11.45□□□□□ -0.58
CLCN4-202ENST00000380833 TRIM45Q9H8W5 580 aaPredicted RBP11.45□□□□□ -0.58
CLCN4-202ENST00000380833 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 SLC12A6Q9UHW9 1150 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 PTPN23Q9H3S7 1636 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 NSFP46459 744 aaKnown RBP11.45□□□□□ -0.58
CLCN4-202ENST00000380833 NUP107P57740 925 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 MORC3Q14149 939 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 KCTD21Q4G0X4 260 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 FRA10AC1Q70Z53 315 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 PDZD4Q76G19 769 aaPredicted RBP11.45□□□□□ -0.58
CLCN4-202ENST00000380833 ELMOD1Q8N336 334 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 OR6B3Q8NGW1 331 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 ZNF341Q9BYN7 854 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 CYP2D7A0A087X1C5 515 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 ENC1O14682 589 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 GNB5O14775 395 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 PMLP29590 882 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 C2orf69Q8N8R5 385 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 OR9Q1Q8NGQ5 310 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 CCT8L2Q96SF2 557 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 PRDM16Q9HAZ2 1276 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 FANCEQ9HB96 536 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 RPRD2Q5VT52 1461 aaKnown RBP11.45□□□□□ -0.58
CLCN4-202ENST00000380833 ATP6V1G1O75348 118 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 RGS20O76081 388 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 CCND2P30279 289 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 BTKQ06187 659 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 SPARCL1Q14515 664 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 CHAMP1Q96JM3 812 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 CCDC134Q9H6E4 229 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 PARVGQ9HBI0 331 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 ZNF804BA4D1E1 1349 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 HLA-DPA1P20036 260 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 MDH1P40925 334 aaKnown RBP11.45□□□□□ -0.58
CLCN4-202ENST00000380833 CYP4F22Q6NT55 531 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 BBS5Q8N3I7 341 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 KCTD6Q8NC69 237 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 MPP6Q9NZW5 540 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 SLC13A4Q9UKG4 626 aa11.45□□□□□ -0.58
CLCN4-202ENST00000380833 TNKSO95271 1327 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 KIF24Q5T7B8 1368 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 FAM25AB3EWG3 89 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 FAM25CB3EWG5 89 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 FAM25GB3EWG6 89 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 M0R3G1 203 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 SGSM2O43147 1006 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 SERPIND1P05546 499 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 CDC25AP30304 524 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 DDX53Q86TM3 631 aaKnown RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 SLC7A3Q8WY07 619 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 ERLEC1Q96DZ1 483 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 TRAPPC9Q96Q05 1148 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 PRPF18Q99633 342 aaKnown RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 CLCA2Q9UQC9 943 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 WBP11Q9Y2W2 641 aaKnown RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 C16orf96A6NNT2 1141 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 ATP4AP20648 1035 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 RASGRF1Q13972 1273 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 RAB44Q7Z6P3 723 aaPredicted RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 PIK3R2O00459 728 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 NCF2P19878 526 aaPredicted RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 SPOPLQ6IQ16 392 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 DARS2Q6PI48 645 aaKnown RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 STAG2Q8N3U4 1231 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 GLT8D2Q9H1C3 349 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 WDR64B1ANS9 1081 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 TOM1L1O75674 476 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 RPN1P04843 607 aaKnown RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 PHKA1P46020 1223 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 RASSF7Q02833 373 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 NAA30Q147X3 362 aaPredicted RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 ZNF180Q9UJW8 692 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 A0A0G2JND7 137 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 FAM95CA0A1B0GW59 222 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 STMND1H3BQB6 276 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 MFN2O95140 757 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 KRT16P08779 473 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 TRIM49P0CI25 452 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 TRIM49CP0CI26 452 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 IREB2P48200 963 aaKnown RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 SUPT20HL1Q3ZLR7 823 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 GPR141Q7Z602 305 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 CCDC84Q86UT8 332 aaPredicted RBP11.44□□□□□ -0.58
CLCN4-202ENST00000380833 THNSL1Q8IYQ7 743 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 SEPT1Q8WYJ6 367 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 KDM3AQ9Y4C1 1321 aa11.44□□□□□ -0.58
CLCN4-202ENST00000380833 RNF103-CHMP3A0A140T963 221 aa11.43□□□□□ -0.58
CLCN4-202ENST00000380833 CTIFO43310 598 aaKnown RBP11.43□□□□□ -0.58
CLCN4-202ENST00000380833 PFKFB2O60825 505 aa11.43□□□□□ -0.58
CLCN4-202ENST00000380833 MOCS2O96007 188 aaPredicted RBP11.43□□□□□ -0.58
CLCN4-202ENST00000380833 CCT3P49368 545 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms