RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 DRAP1Q14919 205 aaPredicted RBP13.71□□□□□ -0.21
VPS16-202ENST00000380445 TMEM132BQ14DG7 1078 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 PRAMEF18Q5VWM3 479 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 TAF4BQ92750 862 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 PACSIN1Q9BY11 444 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 NFASCO94856 1347 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 CES2O00748 559 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 CXCR5P32302 372 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 ABCD1P33897 745 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 NOP2P46087 812 aaKnown RBP13.71□□□□□ -0.21
VPS16-202ENST00000380445 GLE1Q53GS7 698 aaKnown RBP13.71□□□□□ -0.21
VPS16-202ENST00000380445 GJB7Q6PEY0 223 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 PCIF1Q9H4Z3 704 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
VPS16-202ENST00000380445 PMM2O15305 246 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 SLC16A4O15374 487 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 NCK2O43639 380 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 CASP8Q14790 479 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 TRPM4Q8TD43 1214 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 VIPAS39Q9H9C1 493 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 CYP39A1Q9NYL5 469 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 AJAP1Q9UKB5 411 aaPredicted RBP13.71□□□□□ -0.22
VPS16-202ENST00000380445 NENFQ9UMX5 172 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.22
VPS16-202ENST00000380445 EMSYQ7Z589 1322 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 KCNA2P16389 499 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 NPEPPSP55786 919 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 SH3D19Q5HYK7 790 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 SYCE1Q8N0S2 351 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 CNPY4Q8N129 248 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 CEP170P1Q96L14 293 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 PSMB7Q99436 277 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 BCCIPQ9P287 314 aaKnown RBP eCLIP13.7□□□□□ -0.22
VPS16-202ENST00000380445 RLFQ13129 1914 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
VPS16-202ENST00000380445 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 POLR3GO15318 223 aaPredicted RBP13.7□□□□□ -0.22
VPS16-202ENST00000380445 RPS6KA1Q15418 735 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 ANO5Q75V66 913 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 USP37Q86T82 979 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 MCPH1Q8NEM0 835 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 CBWD1Q9BRT8 395 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 NTPCRQ9BSD7 190 aaKnown RBP13.7□□□□□ -0.22
VPS16-202ENST00000380445 RASSF4Q9H2L5 321 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 JPH1Q9HDC5 661 aaPredicted RBP13.7□□□□□ -0.22
VPS16-202ENST00000380445 GABBR1Q9UBS5 961 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 SLC9A2Q9UBY0 812 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 TBX20Q9UMR3 447 aa13.7□□□□□ -0.22
VPS16-202ENST00000380445 H0YCG3 227 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.222e-10■■■□□ 18.2
VPS16-202ENST00000380445 DGAT1O75907 488 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 FTCDO95954 541 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 CCNI2Q6ZMN8 369 aaPredicted RBP13.69□□□□□ -0.22
VPS16-202ENST00000380445 TRMT1LQ7Z2T5 733 aaKnown RBP13.69□□□□□ -0.22
VPS16-202ENST00000380445 MAP4K3Q8IVH8 894 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 CHST13Q8NET6 341 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 U2AF1L4Q8WU68 220 aaKnown RBP13.69□□□□□ -0.22
VPS16-202ENST00000380445 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 A1CFQ9NQ94 594 aaKnown RBP13.69□□□□□ -0.22
VPS16-202ENST00000380445 KMT5AQ9NQR1 393 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 LOC102724159A0A0B4J2E5 919 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 TMEM150BA6NC51 233 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 NPTX2P47972 431 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 RTP1P59025 263 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 MCCD1P59942 119 aaPredicted RBP13.69□□□□□ -0.22
VPS16-202ENST00000380445 PWP2Q15269 919 aaKnown RBP13.69□□□□□ -0.22
VPS16-202ENST00000380445 TMEM161BQ8NDZ6 487 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 DNERQ8NFT8 737 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.69□□□□□ -0.22
VPS16-202ENST00000380445 SLC30A5Q8TAD4 765 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 LMO3Q8TAP4 145 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 PBKQ96KB5 322 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 SELENOOQ9BVL4 669 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 SUGCTQ9HAC7 445 aa13.69□□□□□ -0.22
VPS16-202ENST00000380445 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
VPS16-202ENST00000380445 TNFAIP3P21580 790 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 HSP90B2PQ58FF3 399 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 MIS18BP1Q6P0N0 1132 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 FZD1Q9UP38 647 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 SPATA31C2B4DYI2 1134 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 CNGA1P29973 690 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 KIF22Q14807 665 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 STXBP2Q15833 593 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 PHLDB3Q6NSJ2 640 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 SWSAP1Q6NVH7 229 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 C8orf74Q6P047 294 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
VPS16-202ENST00000380445 LRRC1Q9BTT6 524 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 PDE11AQ9HCR9 933 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.68□□□□□ -0.22
VPS16-202ENST00000380445 USP20Q9Y2K6 914 aa13.68□□□□□ -0.22
VPS16-202ENST00000380445 DENND3A2RUS2 1198 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 RGS20O76081 388 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 TMEM253P0C7T8 217 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 MATR3P43243 847 aaKnown RBP eCLIP13.67□□□□□ -0.22
VPS16-202ENST00000380445 MXI1P50539 228 aa13.67□□□□□ -0.22
VPS16-202ENST00000380445 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms