RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MAP1SQ66K74 1059 aaPredicted RBP25.14■■□□□ 1.61
VPS16-201ENST00000380443 ALKBH5Q6P6C2 394 aaKnown RBP25.14■■□□□ 1.61
VPS16-201ENST00000380443 MMGT1Q8N4V1 131 aa25.14■■□□□ 1.61
VPS16-201ENST00000380443 NOA1Q8NC60 698 aaKnown RBP25.14■■□□□ 1.61
VPS16-201ENST00000380443 PROCA1Q8NCQ7 364 aaPredicted RBP25.14■■□□□ 1.61
VPS16-201ENST00000380443 TMEM161BQ8NDZ6 487 aa25.14■■□□□ 1.61
VPS16-201ENST00000380443 KCNN1Q92952 543 aa25.14■■□□□ 1.61
VPS16-201ENST00000380443 CEP170P1Q96L14 293 aa25.14■■□□□ 1.61
VPS16-201ENST00000380443 SALL4Q9UJQ4 1053 aa25.14■■□□□ 1.61
VPS16-201ENST00000380443 F8VZ95 297 aa25.13■■□□□ 1.61
VPS16-201ENST00000380443 PAFAH1B1P43034 410 aa25.13■■□□□ 1.61
VPS16-201ENST00000380443 IREB2P48200 963 aaKnown RBP25.13■■□□□ 1.61
VPS16-201ENST00000380443 XKR3Q5GH77 459 aa25.13■■□□□ 1.61
VPS16-201ENST00000380443 PDLIM7Q9NR12 457 aa25.13■■□□□ 1.61
VPS16-201ENST00000380443 SLC16A4O15374 487 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 TBC1D8O95759 1140 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 KLRC1P26715 233 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 NPTX2P47972 431 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 NPEPPSP55786 919 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 ACTR2P61160 394 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 LONRF2Q1L5Z9 754 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 PLA2G4FQ68DD2 849 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 USP37Q86T82 979 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 LMBR1Q8WVP7 490 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 CAPZA3Q96KX2 299 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 PNKPQ96T60 521 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 TLR10Q9BXR5 811 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 KMT5AQ9NQR1 393 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 KIAA1217Q5T5P2 1943 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 CES2O00748 559 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 TFRCP02786 760 aaKnown RBP25.12■■□□□ 1.61
VPS16-201ENST00000380443 RHOXF2BP0C7M4 288 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 PPATQ06203 517 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 DRAP1Q14919 205 aaPredicted RBP25.12■■□□□ 1.61
VPS16-201ENST00000380443 SWSAP1Q6NVH7 229 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 ANKRD13CQ8N6S4 541 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 RHOXF2Q9BQY4 288 aa25.12■■□□□ 1.61
VPS16-201ENST00000380443 CCDC169A6NNP5 214 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 CXCL11O14625 94 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 ZNF862O60290 1169 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 ATG7O95352 703 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 SUPT20HL2P0C7V6 817 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 TRIM49P0CI25 452 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 TRIM49CP0CI26 452 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 MAP9Q49MG5 647 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 BEND6Q5SZJ8 279 aaPredicted RBP25.11■■□□□ 1.61
VPS16-201ENST00000380443 ANKRD35Q8N283 1001 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 LMO3Q8TAP4 145 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 UBE2Q2Q8WVN8 375 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 CBWD1Q9BRT8 395 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 ATP6V0A4Q9HBG4 840 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 GPRC5CQ9NQ84 441 aa25.11■■□□□ 1.61
VPS16-201ENST00000380443 IGSF9BQ9UPX0 1349 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 BUB1O43683 1085 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 EVI5O60447 810 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 H2AFZP0C0S5 128 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 COPB2P35606 906 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 GABPB1Q06547 395 aaPredicted RBP25.1■■□□□ 1.61
VPS16-201ENST00000380443 ENOX2Q16206 610 aaKnown RBP25.1■■□□□ 1.61
VPS16-201ENST00000380443 H2AFVQ71UI9 128 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 HDXQ7Z353 690 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 GPIHBP1Q8IV16 184 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 IFT74Q96LB3 600 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 FUT8Q9BYC5 575 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 AJAP1Q9UKB5 411 aaPredicted RBP25.1■■□□□ 1.61
VPS16-201ENST00000380443 A0A0G2JMZ2 1700 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 WDR81Q562E7 1941 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 EMSYQ7Z589 1322 aa25.1■■□□□ 1.61
VPS16-201ENST00000380443 PALMO75781 387 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 SEC31AO94979 1220 aaKnown RBP25.09■■□□□ 1.61
VPS16-201ENST00000380443 FAM193AP78312 1265 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 MEI1Q5TIA1 1274 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 CCDC181Q5TID7 509 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 SLC30A5Q8TAD4 765 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 CALR3Q96L12 384 aaKnown RBP25.09■■□□□ 1.61
VPS16-201ENST00000380443 PCIF1Q9H4Z3 704 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 CYP26B1Q9NR63 512 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 POLR2AP24928 1970 aaKnown RBP25.09■■□□□ 1.61
VPS16-201ENST00000380443 MYH10P35580 1976 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 PAPPA2Q9BXP8 1791 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 GRID2IPA4D2P6 1211 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 TMEM150BA6NC51 233 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 GTF2H1P32780 548 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 CFAP221Q4G0U5 840 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 EPC2Q52LR7 807 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 GJB7Q6PEY0 223 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.09■■□□□ 1.61
VPS16-201ENST00000380443 RDH13Q8NBN7 331 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 TMC2Q8TDI7 906 aa25.09■■□□□ 1.61
VPS16-201ENST00000380443 A0A0G2JLL6 359 aaPredicted RBP25.08■■□□□ 1.61
VPS16-201ENST00000380443 DENND3A2RUS2 1198 aa25.08■■□□□ 1.61
VPS16-201ENST00000380443 PDE2AO00408 941 aaPredicted RBP25.08■■□□□ 1.61
VPS16-201ENST00000380443 MAP2K7O14733 419 aa25.08■■□□□ 1.61
VPS16-201ENST00000380443 ZNF185O15231 689 aa25.08■■□□□ 1.61
VPS16-201ENST00000380443 ITGBL1O95965 494 aaPredicted RBP25.08■■□□□ 1.61
VPS16-201ENST00000380443 GARTP22102 1010 aa25.08■■□□□ 1.61
VPS16-201ENST00000380443 CNGA1P29973 690 aa25.08■■□□□ 1.61
VPS16-201ENST00000380443 PRKCEQ02156 737 aa25.08■■□□□ 1.61
VPS16-201ENST00000380443 PRKG1Q13976 671 aa25.08■■□□□ 1.61
VPS16-201ENST00000380443 KIF22Q14807 665 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms