RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 SMG7Q92540 1137 aaKnown RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 SLITRK1Q96PX8 696 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 RUFY1Q96T51 708 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 BAG1Q99933 345 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ABCF3Q9NUQ8 709 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 IMPACTQ9P2X3 320 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 TMX2Q9Y320 296 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 SLIT2O94813 1529 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 RFX7Q2KHR2 1363 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 SPTA1P02549 2419 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 LRP6O75581 1613 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 GOLGA8IPA6NC78 632 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 GOLGA8JA6NMD2 632 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ERLIN1O75477 346 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ASMTLO95671 621 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ADH1AP07327 375 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 RALAP11233 206 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 CDC27P30260 824 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 NR5A1Q13285 461 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 XKR3Q5GH77 459 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 MB21D2Q8IYB1 491 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 PDE11AQ9HCR9 933 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 EHD2Q9NZN4 543 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ZMYM6O95789 1325 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 E7EVH7 732 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 RNASEH1O60930 286 aaKnown RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 HSPA8P11142 646 aaKnown RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ANTXR2P58335 489 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 BSPRYQ5W0U4 402 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 CNNM4Q6P4Q7 775 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 NOTUMQ6P988 496 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 DCP1BQ8IZD4 617 aaKnown RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ACBD3Q9H3P7 528 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 UBN1Q9NPG3 1134 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 hCG_1984214I3L0E3 225 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 STXBP3O00186 592 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 DLL1O00548 723 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 PEX10O60683 326 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 KIAA0754O94854 1291 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ICAM1P05362 532 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 SELPP16109 830 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF543Q08ER8 600 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ELAVL2Q12926 359 aaKnown RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 DCAF4L1Q3SXM0 396 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF667Q5HYK9 610 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 GLRA4Q5JXX5 417 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 RARS2Q5T160 578 aaKnown RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 FAM171A1Q5VUB5 890 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 TTC19Q6DKK2 380 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 RBM43Q6ZSC3 357 aaKnown RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 PHLDB2Q86SQ0 1253 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF713Q8N859 430 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 LENG1Q96BZ8 264 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-202ENST00000379446 PLVAPQ9BX97 442 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 SLC38A7Q9NVC3 462 aa7.06□□□□□ -1.28
NEDD9-202ENST00000379446 FAM205AQ6ZU69 1335 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 UBR1Q8IWV7 1749 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 RGPD8O14715 1765 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 BICDL2A1A5D9 508 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 H7C4K7 107 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 OPLAHO14841 1288 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 CUTAO60888 179 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 PPFIA4O75335 1185 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 CSDE1O75534 798 aaKnown RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 PRKCBP05771 671 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 ETF1P62495 437 aaKnown RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 CCL14Q16627 93 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 IRAK1BP1Q5VVH5 260 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 KIAA1324Q6UXG2 1013 aaKnown RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 CATSPERGQ6ZRH7 1159 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 NDUFAF2Q8N183 169 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 MRPL4Q9BYD3 311 aaKnown RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 KANSL3Q9P2N6 904 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 PCDHB6Q9Y5E3 794 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 A8MXQ7 604 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 KIF5CO60282 957 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 NPTXRO95502 500 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 P4HBP07237 508 aaKnown RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 PRR29P0C7W0 189 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 CCDC15Q0P6D6 951 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF394Q53GI3 561 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 NFRKBQ6P4R8 1299 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 CERS5Q8N5B7 392 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 MTMR14Q8NCE2 650 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 COPS5Q92905 334 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 ZNF560Q96MR9 790 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 FAM169AQ9Y6X4 670 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 FAM208AQ9UK61 1670 aaKnown RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 NT5C1B-RDH14C9J2C7 533 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 NFIBO00712 420 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 SH2B2O14492 632 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 CASP1P29466 404 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 PRELPP51888 382 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 ACLYP53396 1101 aa7.05□□□□□ -1.28
NEDD9-202ENST00000379446 PRPF38BQ5VTL8 546 aaKnown RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 E4F1Q66K89 784 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-202ENST00000379446 SLFN12LQ6IEE8 588 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms