RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 PIGOQ8TEQ8 1089 aa27.45■■□□□ 1.98
TNFRSF4-201ENST00000379236 PGBD4Q96DM1 585 aa27.45■■□□□ 1.98
TNFRSF4-201ENST00000379236 TRAIPQ9BWF2 469 aa27.45■■□□□ 1.98
TNFRSF4-201ENST00000379236 ATF7P17544 494 aaPredicted RBP27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 RARRES1P49788 294 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 NDUFV1P49821 464 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 KRT17Q04695 432 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 NCBP1Q09161 790 aaKnown RBP27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 COL19A1Q14993 1142 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 LONRF3Q496Y0 759 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 GLB1LQ6UWU2 654 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 LRRC55Q6ZSA7 311 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 BDP1A6H8Y1 2624 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 MUC3AQ02505 3323 aa27.44■■□□□ 1.98
TNFRSF4-201ENST00000379236 USO1O60763 962 aaKnown RBP27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 XRCC6P12956 609 aaKnown RBP eCLIP27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 IL9P15248 144 aa27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 GTF2F1P35269 517 aaKnown RBP eCLIP27.43■■□□□ 1.983e-7■■■■■ 29.2
TNFRSF4-201ENST00000379236 NRIP1P48552 1158 aa27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 HAUS3Q68CZ6 603 aa27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 PDE12Q6L8Q7 609 aaKnown RBP27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 ADGRD2Q7Z7M1 963 aa27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 RBM23Q86U06 439 aaKnown RBP27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 MRPS27Q92552 414 aaKnown RBP27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 LPPQ93052 612 aa27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 TLE6Q9H808 572 aa27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 XPNPEP1Q9NQW7 623 aa27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 ENTPD7Q9NQZ7 604 aa27.43■■□□□ 1.98
TNFRSF4-201ENST00000379236 GRXCR2A6NFK2 248 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 INO80B-WBP1J3KQ70 363 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 MCM2P49736 904 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 RNASELQ05823 741 aaKnown RBP27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 PCBP1Q15365 356 aaKnown RBP eCLIP27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 CLUL1Q15846 466 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 NACC1Q96RE7 527 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 MINDY3Q9H8M7 445 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 SPG21Q9NZD8 308 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 LZTS1Q9Y250 596 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 INPP5FQ9Y2H2 1132 aa27.42■■□□□ 1.98
TNFRSF4-201ENST00000379236 FSD2A1L4K1 749 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 PBX3P40426 434 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 ALDH7A1P49419 539 aaKnown RBP27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 PLCB3Q01970 1234 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 CTC1Q2NKJ3 1217 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 MCTP1Q6DN14 999 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 CATSPER3Q86XQ3 398 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 URGCPQ8TCY9 931 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 POLR3CQ9BUI4 534 aaPredicted RBP27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 RAB34Q9BZG1 259 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 PCDHB2Q9Y5E7 798 aa27.41■■□□□ 1.98
TNFRSF4-201ENST00000379236 A0A087WWV3 80 aa27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 CARNS1A5YM72 827 aa27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 LINC01565O15544 149 aa27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 MED24O75448 989 aa27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 SSTR3P32745 418 aaPredicted RBP27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 PLPP4Q5VZY2 271 aa27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 EFHBQ8N7U6 833 aa27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 TMX3Q96JJ7 454 aa27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 POLR3FQ9H1D9 316 aaPredicted RBP27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 PCDHGC5Q9Y5F6 944 aa27.4■■□□□ 1.98
TNFRSF4-201ENST00000379236 TDRD15B5MCY1 1934 aaKnown RBP27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 ZNF623O75123 536 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 ZC3H11AO75152 810 aaKnown RBP eCLIP27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 SPATA31C1P0DKV0 1188 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 U2AF2P26368 475 aaKnown RBP eCLIP27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 AXLP30530 894 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 CA8P35219 290 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 LTBRP36941 435 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 PTENP60484 403 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 ERVFC1P60507 584 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 ADAM15Q13444 863 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 CAPSQ13938 189 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 NBR1Q14596 966 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 BMS1Q14692 1282 aaKnown RBP27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 NOMO2Q5JPE7 1267 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 MAEAQ7L5Y9 396 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 MCPH1Q8NEM0 835 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 TMEM169Q96HH4 297 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 TCF25Q9BQ70 676 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 CD207Q9UJ71 328 aa27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 DBR1Q9UK59 544 aaKnown RBP27.39■■□□□ 1.98
TNFRSF4-201ENST00000379236 ARHGEF35A5YM69 484 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 H3BQV1 296 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 TBX10O75333 385 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 SRGAP2BP0DMP2 458 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 RPA1P27694 616 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 BCAR1P56945 870 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 POU5F1BQ06416 359 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 NOTUMQ6P988 496 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 POTEGQ6S5H5 508 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 TMC7Q7Z402 723 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 FAM178BQ8IXR5 827 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 CNNM3Q8NE01 707 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 ASAP3Q8TDY4 903 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 CDCA3Q99618 268 aaPredicted RBP27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 STK24Q9Y6E0 443 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 CNTNAP2Q9UHC6 1331 aa27.38■■□□□ 1.97
TNFRSF4-201ENST00000379236 ARL2P36404 184 aa27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 CCT6AP40227 531 aaKnown RBP27.37■■□□□ 1.97
TNFRSF4-201ENST00000379236 DLX2Q07687 328 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms