RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 NONOQ15233 471 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRPF18-202ENST00000378572 DUSP6Q16828 381 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 KCNT2Q6UVM3 1135 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 KRT25Q7Z3Z0 450 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 TMC7Q7Z402 723 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 LINC01465Q8N7H1 131 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 RDM1Q8NG50 284 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 HELQQ8TDG4 1101 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 CASD1Q96PB1 797 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 LMBRD1Q9NUN5 540 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 DACT1Q9NYF0 836 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 RCOR1Q9UKL0 485 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 C5orf42Q9H799 3197 aa15.34■□□□□ 0.05
PRPF18-202ENST00000378572 MARCH6O60337 910 aa15.33■□□□□ 0.04
PRPF18-202ENST00000378572 YEATS4O95619 227 aa15.33■□□□□ 0.04
PRPF18-202ENST00000378572 Q4G0T1 1027 aa15.33■□□□□ 0.04
PRPF18-202ENST00000378572 XKR3Q5GH77 459 aa15.33■□□□□ 0.04
PRPF18-202ENST00000378572 TWF2Q6IBS0 349 aaKnown RBP15.33■□□□□ 0.04
PRPF18-202ENST00000378572 HFE2Q6ZVN8 426 aa15.33■□□□□ 0.04
PRPF18-202ENST00000378572 SPG21Q9NZD8 308 aa15.33■□□□□ 0.04
PRPF18-202ENST00000378572 DDX25Q9UHL0 483 aaKnown RBP15.33■□□□□ 0.04
PRPF18-202ENST00000378572 NOL7Q9UMY1 257 aaKnown RBP15.33■□□□□ 0.04
PRPF18-202ENST00000378572 MORC2Q9Y6X9 1032 aaPredicted RBP15.33■□□□□ 0.04
PRPF18-202ENST00000378572 CCDC194A0A1B0GVG4 234 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 SFPQP23246 707 aaKnown RBP eCLIP15.32■□□□□ 0.04
PRPF18-202ENST00000378572 SP100P23497 879 aaPredicted RBP15.32■□□□□ 0.04
PRPF18-202ENST00000378572 DRP2Q13474 957 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 INF2Q27J81 1249 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 LETM2Q2VYF4 491 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 LONRF3Q496Y0 759 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 HERC4Q5GLZ8 1057 aaPredicted RBP15.32■□□□□ 0.04
PRPF18-202ENST00000378572 ZBTB33Q86T24 672 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 RHPN2Q8IUC4 686 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 VN1R2Q8NFZ6 395 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 LEO1Q8WVC0 666 aaPredicted RBP15.32■□□□□ 0.04
PRPF18-202ENST00000378572 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 MFSD14AQ96MC6 490 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 NLRP4Q96MN2 994 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 MRPL9Q9BYD2 267 aaKnown RBP15.32■□□□□ 0.04
PRPF18-202ENST00000378572 TFIP11Q9UBB9 837 aaKnown RBP15.32■□□□□ 0.04
PRPF18-202ENST00000378572 PIN4Q9Y237 131 aaKnown RBP15.32■□□□□ 0.04
PRPF18-202ENST00000378572 LZTS1Q9Y250 596 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 MUC6Q6W4X9 2439 aa15.32■□□□□ 0.04
PRPF18-202ENST00000378572 FSCN2O14926 492 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 PSMD10O75832 226 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 PLCB3Q01970 1234 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 EARS2Q5JPH6 523 aaKnown RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 CLLU1OSQ5K130 101 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 PLA2G4FQ68DD2 849 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 LRRC55Q6ZSA7 311 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 PHF7Q9BWX1 381 aaPredicted RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 NGRNQ9NPE2 291 aaKnown RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 RNF19AQ9NV58 838 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 SUCLA2Q9P2R7 463 aaPredicted RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 INPP5FQ9Y2H2 1132 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 A0A087WZ62 844 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 HIDE1A8MVS5 230 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 EDIL3O43854 480 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 ZC3H11AO75152 810 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 PRPF40AO75400 957 aaKnown RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 SMC1AQ14683 1233 aaKnown RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 BMS1Q14692 1282 aaKnown RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 PIK3AP1Q6ZUJ8 805 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 CATSPER4Q7RTX7 472 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 TMEM169Q96HH4 297 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 FDXACB1Q9BRP7 624 aaPredicted RBP15.31■□□□□ 0.04
PRPF18-202ENST00000378572 GDPD2Q9HCC8 539 aa15.31■□□□□ 0.04
PRPF18-202ENST00000378572 A0A0U1RQF3 1178 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 NT5C1B-RDH14C9J2C7 533 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 BMP15O95972 392 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 ALDH7A1P49419 539 aaKnown RBP15.3■□□□□ 0.04
PRPF18-202ENST00000378572 PSMC5P62195 406 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 CDC42EP1Q00587 391 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 RNASELQ05823 741 aaKnown RBP15.3■□□□□ 0.04
PRPF18-202ENST00000378572 ANKRD54Q6NXT1 300 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 ETNPPLQ8TBG4 499 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 KCNG4Q8TDN1 519 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 EDAQ92838 391 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 JPH2Q9BR39 696 aaPredicted RBP15.3■□□□□ 0.04
PRPF18-202ENST00000378572 NIFKQ9BYG3 293 aaKnown RBP15.3■□□□□ 0.04
PRPF18-202ENST00000378572 BMP2KQ9NSY1 1161 aaPredicted RBP15.3■□□□□ 0.04
PRPF18-202ENST00000378572 CLIC4Q9Y696 253 aa15.3■□□□□ 0.04
PRPF18-202ENST00000378572 CYP3A7-CYP3A51PA0A087WV96 503 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 FAM205CA6NFA0 338 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 LOC730098B7Z3J9 87 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 SLC37A4O43826 429 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 EOMESO95936 686 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 CYP3A7P24462 503 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 ORC2Q13416 577 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 CBX2Q14781 532 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 SLC39A14Q15043 492 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 STK38Q15208 465 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 PTPAQ15257 358 aa15.29■□□□□ 0.04
PRPF18-202ENST00000378572 SF3A1Q15459 793 aaKnown RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 TARBP2Q15633 366 aaKnown RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 SKOR2Q2VWA4 1001 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-202ENST00000378572 GLB1LQ6UWU2 654 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms