RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 ZNF202O95125 648 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 SFPQP23246 707 aaKnown RBP eCLIP12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 DEFB103AP81534 67 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 ADAM2Q99965 735 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 KMT5AQ9NQR1 393 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 KBTBD4Q9NVX7 518 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 PIN4Q9Y237 131 aaKnown RBP12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 B4GALT5O43286 388 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 MGEA5O60502 916 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 SLFN14P0C7P3 912 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 PLS3P13797 630 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 BMP8BP34820 402 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 NAMPTP43490 491 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 PPP2R5AQ15172 486 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 RTN4RL1Q86UN2 441 aaPredicted RBP12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 CNNM3Q8NE01 707 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 PRO3102Q9H379 93 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 PARVGQ9HBI0 331 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 ERVK-5Q9HDB9 667 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 LARSQ9P2J5 1176 aaKnown RBP12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 SLC4A7Q9Y6M7 1214 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 TANC1Q9C0D5 1861 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 TTLL13PA6NNM8 815 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 KCNJ6P48051 423 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 WDR5P61964 334 aaKnown RBP12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 ZBTB8OSQ8IWT0 167 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 HPS3Q969F9 1004 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 DNAJC19Q96DA6 116 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 CPB2Q96IY4 423 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 TRIM9Q9C026 710 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 TNMDQ9H2S6 317 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 CUEDC2Q9H467 287 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 ODF2LQ9ULJ1 636 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 SQORQ9Y6N5 450 aa12.94□□□□□ -0.34
DEPDC4-202ENST00000378244 SIP14410 1827 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 ABHD14A-ACY1A0A1B0GW23 586 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 K7ERI5 159 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 NR1I2O75469 434 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 ASIC1P78348 528 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 AMPD3Q01432 767 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 CUL4BQ13620 913 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 HERC4Q5GLZ8 1057 aaPredicted RBP12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 TWF2Q6IBS0 349 aaKnown RBP12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 SRGAP1Q7Z6B7 1085 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 SFR1Q86XK3 245 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 RNF169Q8NCN4 708 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 LINC01599Q8WXQ3 324 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 HERVK_113Q902F9 699 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 APBB2Q92870 758 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 PAGE5Q96GU1 130 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 LOXHD1Q8IVV2 1947 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 ENPP3O14638 875 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 TRAK2O60296 914 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 NMT1P30419 496 aaKnown RBP12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 SMTNP53814 917 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 MAPK6Q16659 721 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 KRBA2Q6ZNG9 492 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 ERCC4Q92889 916 aaPredicted RBP12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 MTIF3Q9H2K0 278 aaKnown RBP12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 PANK4Q9NVE7 773 aa12.93□□□□□ -0.34
DEPDC4-202ENST00000378244 FAM237AA0A1B0GTK4 181 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 TSPAN1O60635 241 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 EDN1P05305 212 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 ATP2A2P16615 1042 aaKnown RBP12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 RABGGTBP53611 331 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 FAM160A1Q05DH4 1040 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 SNW1Q13573 536 aaKnown RBP12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 ZC2HC1CQ53FD0 456 aaPredicted RBP12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 FAM178BQ8IXR5 827 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 FMR1NBQ8N0W7 255 aaPredicted RBP12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 GBP4Q96PP9 640 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 PYM1Q9BRP8 204 aaKnown RBP12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 FTHL17Q9BXU8 183 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 C17orf75Q9HAS0 396 aa12.92□□□□□ -0.34
DEPDC4-202ENST00000378244 K7ENM7 598 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 BAIAP3O94812 1187 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 HOXA11P31270 313 aaPredicted RBP12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 HAUS6Q7Z4H7 955 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 MRPL44Q9H9J2 332 aaKnown RBP12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 CHD7Q9P2D1 2997 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 PRKCBP05771 671 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 ZNF131P52739 623 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 UBE2HP62256 183 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 POU5F1BQ06416 359 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 NCBP1Q09161 790 aaKnown RBP12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 PRPF4BQ13523 1007 aaKnown RBP12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 AMHR2Q16671 573 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 TMEM87AQ8NBN3 555 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 TMEM161BQ8NDZ6 487 aa12.91□□□□□ -0.34
DEPDC4-202ENST00000378244 ENGASEQ8NFI3 743 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms