RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 SLC30A5Q8TAD4 765 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 NUDT12Q9BQG2 462 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 MXRA8Q9BRK3 442 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 RUSC1Q9BVN2 902 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 MAGED2Q9UNF1 606 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-203ENST00000378169 STK38LQ9Y2H1 464 aa14.17□□□□□ -0.14
NPHP4-203ENST00000378169 ZNF18P17022 549 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 PHBP35232 272 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-203ENST00000378169 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 CCNYQ8ND76 341 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 ARHGEF2Q92974 986 aaKnown RBP14.16□□□□□ -0.14
NPHP4-203ENST00000378169 PLAAQ9Y263 795 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 KLRC1P26715 233 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 STAT5BP51692 787 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 TMEM35BQ8NCS4 154 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 BBOF1Q8ND07 529 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 SPATA33Q96N06 139 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 SSU72P8A0A1W2PR75 194 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 GGPS1O95749 300 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 ARP10275 920 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 SAT1P21673 171 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 LMNB2Q03252 620 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 KCTD6Q8NC69 237 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 OR6B3Q8NGW1 331 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 RFFLQ8WZ73 363 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 SEMA6BQ9H3T3 888 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 KIAA1586Q9HCI6 787 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 KLHL14Q9P2G3 628 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 ODF2LQ9ULJ1 636 aa14.16□□□□□ -0.14
NPHP4-203ENST00000378169 TTC7AQ9ULT0 858 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-203ENST00000378169 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 MIF4GDA9UHW6 222 aaKnown RBP14.15□□□□□ -0.14
NPHP4-203ENST00000378169 RASGRF2O14827 1237 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 FDX1P10109 184 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 GBP1P32455 592 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 ABCD1P33897 745 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 CAP2P40123 477 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 BBS9Q3SYG4 887 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 PPP6R3Q5H9R7 873 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-203ENST00000378169 RINT1Q6NUQ1 792 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 SNX25Q9H3E2 840 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 GPRC5CQ9NQ84 441 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 NOC2LQ9Y3T9 749 aaKnown RBP14.15□□□□□ -0.14
NPHP4-203ENST00000378169 DLG5Q8TDM6 1919 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 PSMA2P25787 234 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 CASP4P49662 377 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 SYT2Q8N9I0 419 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-203ENST00000378169 RILPQ96NA2 401 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 ERGIC2Q96RQ1 377 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 LACRTQ9GZZ8 138 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 APEX2Q9UBZ4 518 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 PCSK1NQ9UHG2 260 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 PNMA3Q9UL41 463 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 PLAGL2Q9UPG8 496 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 I3L4J1 428 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 PSMC6P62333 389 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 MYO1EQ12965 1108 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 APOBEC3HQ6NTF7 200 aaKnown RBP14.15□□□□□ -0.14
NPHP4-203ENST00000378169 EXOC8Q8IYI6 725 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 GPD1LQ8N335 351 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 TCP11Q8WWU5 503 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.15□□□□□ -0.147e-12■■■■□ 24.5
NPHP4-203ENST00000378169 EHD2Q9NZN4 543 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
NPHP4-203ENST00000378169 PITPNM2Q9BZ72 1349 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 MCF2LO15068 1137 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 XPOTO43592 962 aaKnown RBP14.14□□□□□ -0.15
NPHP4-203ENST00000378169 GNA15P30679 374 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 CXCL9Q07325 125 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 TMED2Q15363 201 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 ALS2CLQ60I27 953 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 MCUR1Q96AQ8 359 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 FAM167AQ96KS9 214 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 PCDHAC2Q9Y5I4 1007 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 SYNGAP1Q96PV0 1343 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 MED7O43513 233 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 DGAT1O75907 488 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 PSMC4P43686 418 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 SARNPP82979 210 aaKnown RBP14.14□□□□□ -0.15
NPHP4-203ENST00000378169 CUL1Q13616 776 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 SNRNP35Q16560 246 aaKnown RBP14.14□□□□□ -0.15
NPHP4-203ENST00000378169 RSRC2Q7L4I2 434 aaKnown RBP14.14□□□□□ -0.15
NPHP4-203ENST00000378169 RIN2Q8WYP3 895 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-203ENST00000378169 HSPH1Q92598 858 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.14□□□□□ -0.152e-7■■■■□ 21.2
NPHP4-203ENST00000378169 HACL1Q9UJ83 578 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 A0A087X0T9 212 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 FAM228BP0C875 321 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 EPC2Q52LR7 807 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 CDKAL1Q5VV42 579 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 DARS2Q6PI48 645 aaKnown RBP14.14□□□□□ -0.15
NPHP4-203ENST00000378169 IL17RAQ96F46 866 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 RIT2Q99578 217 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 PRPSAP2O60256 369 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 RHBDL3P58872 404 aa14.14□□□□□ -0.15
NPHP4-203ENST00000378169 GLE1Q53GS7 698 aaKnown RBP14.14□□□□□ -0.15
NPHP4-203ENST00000378169 HP1BP3Q5SSJ5 553 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-203ENST00000378169 RNPC3Q96LT9 517 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms