RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 FHOD1Q9Y613 1164 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 FAM169AQ9Y6X4 670 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 EBAG9O00559 213 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 TNPO2O14787 897 aaKnown RBP15.61■□□□□ 0.09
TCOF1-202ENST00000377797 FTLP02792 175 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-202ENST00000377797 CETPP11597 493 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 PMS1P54277 932 aaKnown RBP15.61■□□□□ 0.09
TCOF1-202ENST00000377797 HUNKP57058 714 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 GPC5P78333 572 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 TNFAIP2Q03169 654 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 TEX2Q8IWB9 1127 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 FAM193BQ96PV7 902 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-202ENST00000377797 SSU72P8A0A1W2PR75 194 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 STK10O94804 968 aaKnown RBP15.61■□□□□ 0.09
TCOF1-202ENST00000377797 DSG3P32926 999 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 GPC3P51654 580 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 SH3RF1Q7Z6J0 888 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 OTUD6BQ8N6M0 293 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 AGPAT3Q9NRZ7 376 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 NKIRAS1Q9NYS0 192 aa15.61■□□□□ 0.09
TCOF1-202ENST00000377797 PRKCBP05771 671 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 SLC7A5Q01650 507 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 KCNK18Q7Z418 384 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 KIAA0895Q8NCT3 520 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 CAMKK2Q96RR4 588 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 APEX2Q9UBZ4 518 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 ANAPC7Q9UJX3 599 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 PASKQ96RG2 1323 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 MEIS2O14770 477 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 MDM2Q00987 491 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-202ENST00000377797 IFRD2Q12894 506 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-202ENST00000377797 ARHGEF6Q15052 776 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 PPP1R21Q6ZMI0 780 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 ERICH1Q86X53 443 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 SCFD1Q8WVM8 642 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 PARK7Q99497 189 aaKnown RBP15.6■□□□□ 0.09
TCOF1-202ENST00000377797 TOPORSQ9NS56 1045 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-202ENST00000377797 ROBO3Q96MS0 1386 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 NCK2O43639 380 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 ATP5DP30049 168 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 CIITAP33076 1130 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 ZNF157P51786 506 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-202ENST00000377797 SLC18A3Q16572 532 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 CROCCP2Q86T23 111 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 UHMK1Q8TAS1 419 aaKnown RBP15.6■□□□□ 0.09
TCOF1-202ENST00000377797 PDE11AQ9HCR9 933 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 SYNJ2BP-COX16A0A087WUM0 186 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 ADM5C9JUS6 153 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 DYNC1LI2O43237 492 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-202ENST00000377797 CELF2O95319 508 aaKnown RBP15.6■□□□□ 0.09
TCOF1-202ENST00000377797 TBC1D8O95759 1140 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 MUTP22033 750 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 SGO2Q562F6 1265 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 NFRKBQ6P4R8 1299 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 CCDC63Q8NA47 563 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 TMEM35BQ8NCS4 154 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 COX16Q9P0S2 106 aa15.6■□□□□ 0.09
TCOF1-202ENST00000377797 MYCP01106 439 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 PGK2P07205 417 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 GNAT1P11488 350 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 SNX1Q13596 522 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 MXD4Q14582 209 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 DUOXA2Q1HG44 320 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 C11orf70Q9BRQ4 267 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 STK33Q9BYT3 514 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 FGGP02679 453 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 PTPRAP18433 802 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 OR6B2Q6IFH4 312 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 OTOP1Q7RTM1 612 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 OR6J1Q8NGC5 347 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 RABEP2Q9H5N1 569 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 GPRC5DQ9NZD1 345 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 TRIM10Q9UDY6 481 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 AHDC1Q5TGY3 1603 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 TWF2Q6IBS0 349 aaKnown RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 LRRC71Q8N4P6 559 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 TAB3Q8N5C8 712 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 NACA2Q9H009 215 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 MKRN1Q9UHC7 482 aaKnown RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 CYP26A1O43174 497 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 HSPA6P17066 643 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 TBXAS1P24557 533 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 MAP7D3Q8IWC1 876 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 FHDC1Q9C0D6 1143 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 RANBP17Q9H2T7 1088 aaKnown RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 AGO4Q9HCK5 861 aaKnown RBP15.59■□□□□ 0.09
TCOF1-202ENST00000377797 COMMD10Q9Y6G5 202 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 UBE4BO95155 1302 aa15.59■□□□□ 0.09
TCOF1-202ENST00000377797 GH1P01241 217 aa15.58■□□□□ 0.09
TCOF1-202ENST00000377797 ATP1A1P05023 1023 aaKnown RBP15.58■□□□□ 0.09
TCOF1-202ENST00000377797 PGM5Q15124 567 aa15.58■□□□□ 0.09
TCOF1-202ENST00000377797 ENOSF1Q7L5Y1 443 aa15.58■□□□□ 0.09
TCOF1-202ENST00000377797 OR6B3Q8NGW1 331 aa15.58■□□□□ 0.09
TCOF1-202ENST00000377797 TNFRSF25Q93038 417 aa15.58■□□□□ 0.09
TCOF1-202ENST00000377797 PACSIN2Q9UNF0 486 aaPredicted RBP15.58■□□□□ 0.09
TCOF1-202ENST00000377797 IGSF9BQ9UPX0 1349 aa15.58■□□□□ 0.09
TCOF1-202ENST00000377797 EML1O00423 815 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 TBC1D12O60347 775 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 EVI5O60447 810 aa15.58■□□□□ 0.08
TCOF1-202ENST00000377797 OATP04181 439 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms