RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 RNF19AQ9NV58 838 aa18.7■□□□□ 0.58
HMGN4-201ENST00000377575 TYW1Q9NV66 732 aaKnown RBP18.7■□□□□ 0.58
HMGN4-201ENST00000377575 LRWD1Q9UFC0 647 aa18.7■□□□□ 0.58
HMGN4-201ENST00000377575 TCF20Q9UGU0 1960 aaKnown RBP18.7■□□□□ 0.58
HMGN4-201ENST00000377575 ATF7P17544 494 aaPredicted RBP18.69■□□□□ 0.58
HMGN4-201ENST00000377575 CCT6AP40227 531 aaKnown RBP18.69■□□□□ 0.58
HMGN4-201ENST00000377575 PRPHP41219 470 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 PTENP60484 403 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 POU5F1BQ06416 359 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 PDIA5Q14554 519 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 TCEAL5Q5H9L2 206 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 CLLU1OSQ5K130 101 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 LARP1BQ659C4 914 aaKnown RBP18.69■□□□□ 0.58
HMGN4-201ENST00000377575 THNSL1Q8IYQ7 743 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 COLGALT1Q8NBJ5 622 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 PPP2R3CQ969Q6 453 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 MINDY3Q9H8M7 445 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.69■□□□□ 0.58
HMGN4-201ENST00000377575 MYO7AQ13402 2215 aa18.69■□□□□ 0.58
HMGN4-201ENST00000377575 ARHGEF35A5YM69 484 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 NCK2O43639 380 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 CSPG5O95196 566 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 ARL2P36404 184 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 UBE3AQ05086 875 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 NCBP1Q09161 790 aaKnown RBP18.68■□□□□ 0.58
HMGN4-201ENST00000377575 CAPSQ13938 189 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 DTHD1Q6ZMT9 781 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 IFNLR1Q8IU57 520 aaPredicted RBP18.68■□□□□ 0.58
HMGN4-201ENST00000377575 IGSF22Q8N9C0 903 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 SPPL3Q8TCT6 385 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 HELQQ8TDG4 1101 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 ASAP3Q8TDY4 903 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 ADAMTS19Q8TE59 1207 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 SNX29Q8TEQ0 813 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 PGBD4Q96DM1 585 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 NFKBIZQ9BYH8 718 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 CWH43Q9H720 699 aa18.68■□□□□ 0.58
HMGN4-201ENST00000377575 A0A087WWV3 80 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 INO80B-WBP1J3KQ70 363 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 ZNF623O75123 536 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 GLRA2P23416 452 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 AXLP30530 894 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 PPM1AP35813 382 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 KCNQ1P51787 676 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 CUL4AQ13619 759 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 GLB1LQ6UWU2 654 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 POF1BQ8WVV4 589 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 CCDC51Q96ER9 411 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 ZNF558Q96NG5 402 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 HCSTQ9UBK5 93 aa18.67■□□□□ 0.58
HMGN4-201ENST00000377575 TTC28Q96AY4 2481 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.66■□□□□ 0.58
HMGN4-201ENST00000377575 CARNS1A5YM72 827 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 FGF18O76093 207 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 PDCP20941 246 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 ATP2C1P98194 919 aaPredicted RBP18.66■□□□□ 0.58
HMGN4-201ENST00000377575 KRT79Q5XKE5 535 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 NOTUMQ6P988 496 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 PADI6Q6TGC4 694 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 LRRC55Q6ZSA7 311 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 PABPC5Q96DU9 382 aaKnown RBP18.66■□□□□ 0.58
HMGN4-201ENST00000377575 UHRF1Q96T88 793 aaPredicted RBP18.66■□□□□ 0.58
HMGN4-201ENST00000377575 PCDHB2Q9Y5E7 798 aa18.66■□□□□ 0.58
HMGN4-201ENST00000377575 LRRIQ4A6NIV6 560 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 TSPAN1O60635 241 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 BMP1P13497 986 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 KCNA5P22460 613 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 DNAJB1P25685 340 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 HOXA11P31270 313 aaPredicted RBP18.65■□□□□ 0.58
HMGN4-201ENST00000377575 MBTD1Q05BQ5 628 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 CAMK1Q14012 370 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 KCNT2Q6UVM3 1135 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 MAEAQ7L5Y9 396 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 BRAPQ7Z569 592 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 CNNM3Q8NE01 707 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 LPPQ93052 612 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 GPRC5CQ9NQ84 441 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 TLR9Q9NR96 1032 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 DDX19AQ9NUU7 478 aaKnown RBP18.65■□□□□ 0.58
HMGN4-201ENST00000377575 KIAA1024Q9UPX6 916 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 LZTS1Q9Y250 596 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 CNTNAP2Q9UHC6 1331 aa18.65■□□□□ 0.58
HMGN4-201ENST00000377575 TDRD15B5MCY1 1934 aaKnown RBP18.64■□□□□ 0.58
HMGN4-201ENST00000377575 CYP11B2P19099 503 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 COL19A1Q14993 1142 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 LEXMQ3ZCV2 418 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 NOMO2Q5JPE7 1267 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 EP400NLQ6ZTU2 488 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 ZBTB8OSQ8IWT0 167 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 URGCPQ8TCY9 931 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 C2orf40Q9H1Z8 148 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 BHMT2Q9H2M3 363 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 CLDND1Q9NY35 253 aa18.64■□□□□ 0.57
HMGN4-201ENST00000377575 PUF60Q9UHX1 559 aaKnown RBP18.64■□□□□ 0.57
HMGN4-201ENST00000377575 NCOR1O75376 2440 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 MUC3AQ02505 3323 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 MYH11P35749 1972 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 VPS37CA5D8V6 355 aaPredicted RBP18.63■□□□□ 0.57
HMGN4-201ENST00000377575 PLCB3Q01970 1234 aa18.63■□□□□ 0.57
HMGN4-201ENST00000377575 KRT17Q04695 432 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms