RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 FBXO38Q6PIJ6 1188 aa13.67□□□□□ -0.22
VRK3-202ENST00000377011 KIAA0319LQ8IZA0 1049 aa13.67□□□□□ -0.22
VRK3-202ENST00000377011 TC2NQ8N9U0 490 aa13.67□□□□□ -0.22
VRK3-202ENST00000377011 TMEM40Q8WWA1 233 aa13.67□□□□□ -0.22
VRK3-202ENST00000377011 CCDC51Q96ER9 411 aa13.67□□□□□ -0.22
VRK3-202ENST00000377011 MTMR9Q96QG7 549 aa13.67□□□□□ -0.22
VRK3-202ENST00000377011 ARGLU1Q9NWB6 273 aaPredicted RBP13.67□□□□□ -0.22
VRK3-202ENST00000377011 CDY2AQ9Y6F7 541 aa13.67□□□□□ -0.22
VRK3-202ENST00000377011 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.66□□□□□ -0.22
VRK3-202ENST00000377011 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.66□□□□□ -0.22
VRK3-202ENST00000377011 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 EFCAB8A8MWE9 144 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 HBP1O60381 514 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 GNAT1P11488 350 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 MCM7P33993 719 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 RFC2P35250 354 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 CLCN3P51790 818 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 WDR5P61964 334 aaKnown RBP13.66□□□□□ -0.22
VRK3-202ENST00000377011 DPYDQ12882 1025 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 CUL4BQ13620 913 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 PLEKHG4Q58EX7 1191 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 SPECC1Q5M775 1068 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 CDKAL1Q5VV42 579 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 LRRC71Q8N4P6 559 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 CCDC155Q8N6L0 562 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 MTMR10Q9NXD2 777 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 PCDHA2Q9Y5H9 948 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 ITIH6Q6UXX5 1313 aa13.66□□□□□ -0.22
VRK3-202ENST00000377011 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.65□□□□□ -0.22
VRK3-202ENST00000377011 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 OATP04181 439 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 PPP2R5CQ13362 524 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 TMEM266Q2M3C6 531 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 TTC38Q5R3I4 469 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 NCAPH2Q6IBW4 605 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 ANO5Q75V66 913 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 LINC01465Q8N7H1 131 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 LINC01599Q8WXQ3 324 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 PAGE5Q96GU1 130 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 NKX2-4Q9H2Z4 354 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 SEMA6BQ9H3T3 888 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 SLC4A7Q9Y6M7 1214 aa13.65□□□□□ -0.22
VRK3-202ENST00000377011 POTEMA6NI47 508 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 RRN3P2A6NIE6 340 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 AKR1B15C9JRZ8 316 aaPredicted RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 VTNP04004 478 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 GCFC2P16383 781 aaKnown RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 ATP2A2P16615 1042 aaKnown RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 PBX1P40424 430 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 TXKP42681 527 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 JAK3P52333 1124 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 NPEPPSP55786 919 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 SPAG1Q07617 926 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 TUBB2AQ13885 445 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 CTTNQ14247 550 aaKnown RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 GRIN2CQ14957 1233 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 TARBP2Q15633 366 aaKnown RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 FILIP1LQ4L180 1135 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 FAM117BQ6P1L5 589 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 CNKSR3Q6P9H4 555 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 RPAINQ86UA6 219 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 C4orf32Q8N8J7 132 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 MNS1Q8NEH6 495 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 UBXN4Q92575 508 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 SYMPKQ92797 1274 aaKnown RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 DHX58Q96C10 678 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 DYDC2Q96IM9 177 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 FAM20AQ96MK3 541 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 TUBB2BQ9BVA1 445 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 TADA3O75528 432 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 PFKMP08237 780 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 FECHP22830 423 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 CD52P31358 61 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 SFNP31947 248 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 SLC26A2P50443 739 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 MRPS6P82932 125 aaKnown RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 CALCRLQ16602 461 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 TAF2Q6P1X5 1199 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 APTXQ7Z2E3 356 aaKnown RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 IQUBQ8NA54 791 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 MED15Q96RN5 788 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
VRK3-202ENST00000377011 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 GINS2Q9Y248 185 aa13.64□□□□□ -0.23
VRK3-202ENST00000377011 SMIM35A0A1B0GVV1 85 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 SLITRK3O94933 977 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 CCDC175P0C221 793 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 CASQ1P31415 396 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 TUBB4BP68371 445 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 TRIM14Q14142 442 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 E2F4Q16254 413 aa13.63□□□□□ -0.23
VRK3-202ENST00000377011 IL17AQ16552 155 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms