RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 GOLPH3Q9H4A6 298 aa23.59■■□□□ 1.37
RNF39-202ENST00000376751 ATP8B3O60423 1300 aa23.59■■□□□ 1.37
RNF39-202ENST00000376751 GOLGA8IPA6NC78 632 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 GOLGA8JA6NMD2 632 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 USP2O75604 605 aaPredicted RBP23.58■■□□□ 1.37
RNF39-202ENST00000376751 MATR3P43243 847 aaKnown RBP eCLIP23.58■■□□□ 1.37
RNF39-202ENST00000376751 MRPS25P82663 173 aaKnown RBP23.58■■□□□ 1.37
RNF39-202ENST00000376751 CASP8Q14790 479 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 LRRC57Q8N9N7 239 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 FBXO41Q8TF61 875 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 ZBTB9Q96C00 473 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 LRRC1Q9BTT6 524 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 SNCAIPQ9Y6H5 919 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 SBF1O95248 1867 aa23.58■■□□□ 1.37
RNF39-202ENST00000376751 CCDC169A6NNP5 214 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 POLR3GO15318 223 aaPredicted RBP23.58■■□□□ 1.36
RNF39-202ENST00000376751 MAFGO15525 162 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 ADSSP30520 456 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 GCLMP48507 274 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 ARHGAP44Q17R89 818 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 EPC2Q52LR7 807 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 VPS36Q86VN1 386 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 GLYCTKQ8IVS8 523 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 ARHGEF19Q8IW93 802 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 CCDC60Q8IWA6 550 aaPredicted RBP23.58■■□□□ 1.36
RNF39-202ENST00000376751 JPH1Q9HDC5 661 aaPredicted RBP23.58■■□□□ 1.36
RNF39-202ENST00000376751 ZCCHC17Q9NP64 241 aaKnown RBP23.58■■□□□ 1.36
RNF39-202ENST00000376751 RBM12Q9NTZ6 932 aaKnown RBP23.58■■□□□ 1.36
RNF39-202ENST00000376751 TBX20Q9UMR3 447 aa23.58■■□□□ 1.36
RNF39-202ENST00000376751 PFASO15067 1338 aa23.57■■□□□ 1.36
RNF39-202ENST00000376751 MYH9P35579 1960 aaKnown RBP23.57■■□□□ 1.36
RNF39-202ENST00000376751 LRRIQ3A6PVS8 624 aaPredicted RBP23.57■■□□□ 1.36
RNF39-202ENST00000376751 SWSAP1Q6NVH7 229 aa23.57■■□□□ 1.36
RNF39-202ENST00000376751 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.57■■□□□ 1.36
RNF39-202ENST00000376751 CEP170P1Q96L14 293 aa23.57■■□□□ 1.36
RNF39-202ENST00000376751 HINFPQ9BQA5 517 aa23.57■■□□□ 1.36
RNF39-202ENST00000376751 PDE11AQ9HCR9 933 aa23.57■■□□□ 1.36
RNF39-202ENST00000376751 NFASCO94856 1347 aa23.57■■□□□ 1.36
RNF39-202ENST00000376751 H2AFZP0C0S5 128 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 VGLL4Q14135 290 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 SH3D19Q5HYK7 790 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 TREML2Q5T2D2 321 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 H2AFVQ71UI9 128 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 MAP4K3Q8IVH8 894 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 CNKSR2Q8WXI2 1034 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 SLC9A2Q9UBY0 812 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 DMGDHQ9UI17 866 aaKnown RBP23.56■■□□□ 1.36
RNF39-202ENST00000376751 A0A0G2JMZ2 1700 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 SPATA31C2B4DYI2 1134 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 MCM3P25205 808 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 PAFAH1B1P43034 410 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 ACTR2P61160 394 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 FSTL1Q12841 308 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 SUPT20HL1Q3ZLR7 823 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 CBWD2Q8IUF1 395 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 TPCN2Q8NHX9 752 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 ATP6V0A1Q93050 837 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 SAAL1Q96ER3 474 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 XPNPEP1Q9NQW7 623 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 HOXC10Q9NYD6 342 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 MYPNQ86TC9 1320 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 ADGRA3Q8IWK6 1321 aa23.56■■□□□ 1.36
RNF39-202ENST00000376751 DENND3A2RUS2 1198 aa23.55■■□□□ 1.36
RNF39-202ENST00000376751 FOXN3O00409 490 aaPredicted RBP23.55■■□□□ 1.36
RNF39-202ENST00000376751 MAPK13O15264 365 aa23.55■■□□□ 1.36
RNF39-202ENST00000376751 PSAPP07602 524 aa23.55■■□□□ 1.36
RNF39-202ENST00000376751 NOP2P46087 812 aaKnown RBP23.55■■□□□ 1.36
RNF39-202ENST00000376751 SNRPFP62306 86 aaKnown RBP23.55■■□□□ 1.36
RNF39-202ENST00000376751 PRKCEQ02156 737 aa23.55■■□□□ 1.36
RNF39-202ENST00000376751 DMP1Q13316 513 aaPredicted RBP23.55■■□□□ 1.36
RNF39-202ENST00000376751 SLC39A4Q6P5W5 647 aa23.55■■□□□ 1.36
RNF39-202ENST00000376751 CCNI2Q6ZMN8 369 aaPredicted RBP23.55■■□□□ 1.36
RNF39-202ENST00000376751 MSL3Q8N5Y2 521 aaKnown RBP23.55■■□□□ 1.36
RNF39-202ENST00000376751 IWS1Q96ST2 819 aa23.55■■□□□ 1.36
RNF39-202ENST00000376751 PDLIM7Q9NR12 457 aa23.55■■□□□ 1.36
RNF39-202ENST00000376751 N4BP1O75113 896 aaKnown RBP23.54■■□□□ 1.36
RNF39-202ENST00000376751 GALCP54803 685 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 SP2Q02086 613 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 KIF22Q14807 665 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 PTPROQ16827 1216 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 CFAP221Q4G0U5 840 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 ABHD15Q6UXT9 468 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 PALB2Q86YC2 1186 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 SLC17A8Q8NDX2 589 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 TMEM117Q9H0C3 514 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 KMT5AQ9NQR1 393 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 INTUQ9ULD6 942 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 DAAM1Q9Y4D1 1078 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 IGSF9BQ9UPX0 1349 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 LMNB1P20700 586 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 SLC7A5Q01650 507 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 CNTN2Q02246 1040 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 OTUD6AQ7L8S5 288 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 ZNF526Q8TF50 670 aaPredicted RBP23.54■■□□□ 1.36
RNF39-202ENST00000376751 SPIRE2Q8WWL2 714 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 KIFAP3Q92845 792 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 HVCN1Q96D96 273 aa23.54■■□□□ 1.36
RNF39-202ENST00000376751 UBE2TQ9NPD8 197 aaPredicted RBP23.54■■□□□ 1.36
RNF39-202ENST00000376751 SEPT9Q9UHD8 586 aaPredicted RBP23.54■■□□□ 1.36
RNF39-202ENST00000376751 NCANO14594 1321 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms