RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 DLGAP5Q15398 846 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 KYNUQ16719 465 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 IQCKQ8N0W5 287 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 DHX38Q92620 1227 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ARHGEF2Q92974 986 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TMBIM4Q9HC24 238 aa15.48■□□□□ 0.07
TNFRSF1B-201ENST00000376259 MYH13Q9UKX3 1938 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CD19P15391 556 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CD58P19256 250 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ZNF131P52739 623 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 C10orf76Q5T2E6 689 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 DCUN1D2Q6PH85 259 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 LARGE2Q8N3Y3 721 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CAVIN3Q969G5 261 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ACSF2Q96CM8 615 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PWWP2AQ96N64 755 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 HOMER3Q9NSC5 361 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 DDX20Q9UHI6 824 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PIAS1O75925 651 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 DLG4P78352 724 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 EDRF1Q3B7T1 1238 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 FAM182AQ5T1J6 154 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CYFIP1Q7L576 1253 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CPNE8Q86YQ8 564 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 LRRC34Q8IZ02 419 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SYT2Q8N9I0 419 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ZNF564Q8TBZ8 553 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CPA5Q8WXQ8 436 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 AGPAT1Q99943 283 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 C11orf70Q9BRQ4 267 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ALG13Q9NP73 1137 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 GDF3Q9NR23 364 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 FGFR1OP2Q9NVK5 253 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TCP11X1B4DZS4 312 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 EYA4O95677 639 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 GAS8O95995 478 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 VAMP7P51809 220 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 WDR44Q5JSH3 913 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 IRF2BP2Q7Z5L9 587 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 STMN4Q9H169 189 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 APEX2Q9UBZ4 518 aa15.47■□□□□ 0.07
TNFRSF1B-201ENST00000376259 MYO3BQ8WXR4 1341 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SGPL1O95470 568 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ATF2P15336 505 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TMEM179Q6ZVK1 233 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 SEPT12Q8IYM1 358 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PURBQ96QR8 312 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 TOPORSQ9NS56 1045 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 NID2Q14112 1375 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PJA2O43164 708 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 GAP43P17677 238 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 OSTNP61366 133 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 GPC5P78333 572 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 PRUNE1Q86TP1 453 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 FBF1Q8TES7 1133 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 KIFAP3Q92845 792 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 XPO6Q96QU8 1125 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 ERP44Q9BS26 406 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 GANQ9H2C0 597 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 RAVER2Q9HCJ3 691 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 AIPL1Q9NZN9 384 aa15.46■□□□□ 0.07
TNFRSF1B-201ENST00000376259 CCDC6Q16204 474 aa15.46■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ERVK-5Q9HDB9 667 aa15.46■□□□□ 0.06
TNFRSF1B-201ENST00000376259 AGPAT3Q9NRZ7 376 aa15.46■□□□□ 0.06
TNFRSF1B-201ENST00000376259 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.46■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PCDHGC5Q9Y5F6 944 aa15.46■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LRRIQ4A6NIV6 560 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 H0YIN7 160 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 NEBLO76041 1014 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 HNRNPH3P31942 346 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 RNF207Q6ZRF8 634 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CHURC1Q8WUH1 139 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CEP170P1Q96L14 293 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 FAM20AQ96MK3 541 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 NT5C1BQ96P26 610 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 FAM167BQ9BTA0 163 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 STK33Q9BYT3 514 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SLC24A3Q9HC58 644 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 ANAPC5Q9UJX4 755 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 AGTPBP1Q9UPW5 1226 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 F8VZ95 297 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 C21orf2O43822 256 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 BRAFP15056 766 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PRELPP51888 382 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SLC12A3P55017 1021 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 AP3B2Q13367 1082 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 LLGL2Q6P1M3 1020 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 EEPD1Q7L9B9 569 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 AGBL1Q96MI9 1066 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 FAM213AQ9BRX8 229 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 PPP1R12CQ9BZL4 782 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 KCTD10Q9H3F6 313 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 IGSF9BQ9UPX0 1349 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CHUKO15111 745 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 GYS1P13807 737 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 BFSP1Q12934 665 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 SEZ6Q53EL9 994 aa15.45■□□□□ 0.06
TNFRSF1B-201ENST00000376259 CEP55Q53EZ4 464 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms