RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GUCY2CP25092 1073 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 COPB2P35606 906 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 IFFO1Q0D2I5 559 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 KRT71Q3SY84 523 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 SAMD1Q6SPF0 538 aaPredicted RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 MAEAQ7L5Y9 396 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 YTHDF3Q7Z739 585 aaKnown RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 LMO3Q8TAP4 145 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 ERP44Q9BS26 406 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 LXNQ9BS40 222 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 TEKT3Q9BXF9 490 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 MRPL11Q9Y3B7 192 aaKnown RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 ALG6Q9Y672 507 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 MMP10P09238 476 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 RNF187Q5TA31 235 aaPredicted RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 ICE2Q659A1 982 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 CC2D2BQ6DHV5 1058 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 RHOT2Q8IXI1 618 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 STRA6Q9BX79 667 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 PCIF1Q9H4Z3 704 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 IPO5O00410 1097 aaKnown RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 FTLP02792 175 aaPredicted RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 RFX1P22670 979 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 MAGOHP61326 146 aaKnown RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 CLUL1Q15846 466 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 FBXW10Q5XX13 1052 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 DUPD1Q68J44 220 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 MMS22LQ6ZRQ5 1243 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 ATP8B4Q8TF62 1192 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 CHURC1Q8WUH1 139 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 GLG1Q92896 1179 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 MAGOHBQ96A72 148 aaKnown RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 ERVK-5Q9HDB9 667 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 CNOT8Q9UFF9 292 aaKnown RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 GGA2Q9UJY4 613 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 TRPC5Q9UL62 973 aaPredicted RBP15.74■□□□□ 0.11
MSH5-201ENST00000375703 TMX2Q9Y320 296 aa15.74■□□□□ 0.11
MSH5-201ENST00000375703 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 PPFIA2O75334 1257 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 DLG4P78352 724 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 CETN1Q12798 172 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 IFT88Q13099 833 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 MYBPC2Q14324 1141 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 DAW1Q8N136 415 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 SLC20A1Q8WUM9 679 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 ALG3Q92685 438 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 TMOD4Q9NZQ9 345 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 CTTNBP2NLQ9P2B4 639 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 FAM187AA6NFU0 413 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 H0YHG0 523 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 K7ENM7 598 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 DDX39AO00148 427 aaKnown RBP15.73■□□□□ 0.11
MSH5-201ENST00000375703 TRAPPC3O43617 180 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 EIF3BP55884 814 aaKnown RBP15.73■□□□□ 0.11
MSH5-201ENST00000375703 CYFIP2Q96F07 1278 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 HERC5Q9UII4 1024 aaKnown RBP15.73■□□□□ 0.11
MSH5-201ENST00000375703 BCS1LQ9Y276 419 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 NRXN2Q9P2S2 1712 aa15.73■□□□□ 0.11
MSH5-201ENST00000375703 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
MSH5-201ENST00000375703 MAPK7Q13164 816 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 DHX34Q14147 1143 aaKnown RBP15.72■□□□□ 0.11
MSH5-201ENST00000375703 SPDYCQ5MJ68 293 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 PADI6Q6TGC4 694 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 INTS8Q75QN2 995 aaKnown RBP15.72■□□□□ 0.11
MSH5-201ENST00000375703 RANBP17Q9H2T7 1088 aaKnown RBP15.72■□□□□ 0.11
MSH5-201ENST00000375703 SMCHD1A6NHR9 2005 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 DCDC2CA8MYV0 355 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 TCP10L2B9ZVM9 353 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 FSBPO95073 299 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 VCAM1P19320 739 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 VAMP7P51809 220 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 HADHBP55084 474 aaKnown RBP15.72■□□□□ 0.11
MSH5-201ENST00000375703 B3GNT9Q6UX72 402 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 UBL4BQ8N7F7 174 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 TXLNGYQ9BZA5 131 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 ZDHHC18Q9NUE0 388 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 LARSQ9P2J5 1176 aaKnown RBP15.72■□□□□ 0.11
MSH5-201ENST00000375703 SNX24Q9Y343 169 aa15.72■□□□□ 0.11
MSH5-201ENST00000375703 HNRNPH1P31943 449 aaKnown RBP15.71■□□□□ 0.11
MSH5-201ENST00000375703 FNTAP49354 379 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 PLTPP55058 493 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 GPC5P78333 572 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 AOC3Q16853 763 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 AADACL2Q6P093 401 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 ARHGEF19Q8IW93 802 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 RPUSD2Q8IZ73 545 aaKnown RBP15.71■□□□□ 0.11
MSH5-201ENST00000375703 C3orf20Q8ND61 904 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 RAPGEF5Q92565 580 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 VTI1AQ96AJ9 217 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 PSMD1Q99460 953 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 MXRA8Q9BRK3 442 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 TMEM206Q9H813 350 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 LRRC4CQ9HCJ2 640 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 TMEM110-MUSTN1A8MSY1 372 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 MIF4GDA9UHW6 222 aaKnown RBP15.71■□□□□ 0.11
MSH5-201ENST00000375703 TISP43B9A030 160 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 USP8P40818 1118 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 GCLMP48507 274 aa15.71■□□□□ 0.11
MSH5-201ENST00000375703 PPP3CAQ08209 521 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms