RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 USTQ9Y2C2 406 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 KIF3AQ9Y496 699 aa13.65□□□□□ -0.22
LSM2-208ENST00000375661 FAM205CA6NFA0 338 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 CLASP2O75122 1294 aaKnown RBP13.64□□□□□ -0.23
LSM2-208ENST00000375661 BRD1O95696 1058 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 CLCN3P51790 818 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 POLGP54098 1239 aaPredicted RBP13.64□□□□□ -0.23
LSM2-208ENST00000375661 CDC42EP1Q00587 391 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 CLLU1OSQ5K130 101 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 LARP1BQ659C4 914 aaKnown RBP13.64□□□□□ -0.23
LSM2-208ENST00000375661 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
LSM2-208ENST00000375661 KIAA1841Q6NSI8 718 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 KRT25Q7Z3Z0 450 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 ZNF598Q86UK7 904 aaKnown RBP13.64□□□□□ -0.23
LSM2-208ENST00000375661 TDRD5Q8NAT2 981 aaKnown RBP13.64□□□□□ -0.23
LSM2-208ENST00000375661 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 IRAK3Q9Y616 596 aa13.64□□□□□ -0.23
LSM2-208ENST00000375661 DARSP14868 501 aaKnown RBP13.63□□□□□ -0.23
LSM2-208ENST00000375661 SP100P23497 879 aaPredicted RBP13.63□□□□□ -0.23
LSM2-208ENST00000375661 CIITAP33076 1130 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 PBX3P40426 434 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 ALDH7A1P49419 539 aaKnown RBP13.63□□□□□ -0.23
LSM2-208ENST00000375661 CLCN5P51795 746 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 NONOQ15233 471 aaKnown RBP eCLIP13.63□□□□□ -0.23
LSM2-208ENST00000375661 SAFBQ15424 915 aaKnown RBP eCLIP13.63□□□□□ -0.23
LSM2-208ENST00000375661 ATAT1Q5SQI0 421 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 PIK3AP1Q6ZUJ8 805 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 TMEM105Q8N8V8 129 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 TMEM169Q96HH4 297 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 TRAIPQ9BWF2 469 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 BRMS1Q9HCU9 246 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 CHST12Q9NRB3 414 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 NRBP2Q9NSY0 501 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 GABBR1Q9UBS5 961 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 STK39Q9UEW8 545 aa13.63□□□□□ -0.23
LSM2-208ENST00000375661 CCDC194A0A1B0GVG4 234 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 PRR23AA6NEV1 266 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 WDR64B1ANS9 1081 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 CXCL14O95715 111 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 SKIP12755 728 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 SYT1P21579 422 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 GPC3P51654 580 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 USP11P51784 963 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 BCAR1P56945 870 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 BECN1Q14457 450 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 INF2Q27J81 1249 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 PPFIBP1Q86W92 1011 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 TMEM87AQ8NBN3 555 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 RNF169Q8NCN4 708 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 HELQQ8TDG4 1101 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 ZBP1Q9H171 429 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 FOXP1Q9H334 677 aaPredicted RBP13.62□□□□□ -0.23
LSM2-208ENST00000375661 SAMM50Q9Y512 469 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 C2orf16Q68DN1 1984 aa13.62□□□□□ -0.23
LSM2-208ENST00000375661 H3BQV1 296 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 OATP04181 439 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 CTSAP10619 480 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 U2AF2P26368 475 aaKnown RBP eCLIP13.61□□□□□ -0.23
LSM2-208ENST00000375661 SFNP31947 248 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 RARS2Q5T160 578 aaKnown RBP13.61□□□□□ -0.23
LSM2-208ENST00000375661 ASCL5Q7RTU5 278 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 TRMT1LQ7Z2T5 733 aaKnown RBP13.61□□□□□ -0.23
LSM2-208ENST00000375661 DDX53Q86TM3 631 aaKnown RBP13.61□□□□□ -0.23
LSM2-208ENST00000375661 VPS52Q8N1B4 723 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 LRRC71Q8N4P6 559 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 SCLT1Q96NL6 688 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 MFSD1Q9H3U5 465 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 CYP26B1Q9NR63 512 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 CDH22Q9UJ99 828 aa13.61□□□□□ -0.23
LSM2-208ENST00000375661 DBR1Q9UK59 544 aaKnown RBP13.61□□□□□ -0.23
LSM2-208ENST00000375661 CYP3A7-CYP3A51PA0A087WV96 503 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.6□□□□□ -0.23
LSM2-208ENST00000375661 WNT7AO00755 349 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 ZNF862O60290 1169 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
LSM2-208ENST00000375661 PDCP20941 246 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 CYP3A7P24462 503 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 JAK3P52333 1124 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 TBC1D8BQ0IIM8 1120 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 PRR16Q569H4 304 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 NOSTRINQ8IVI9 506 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 SLC22A17Q8WUG5 538 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 NLRP7Q8WX94 980 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 LENG9Q96B70 501 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 ACSF2Q96CM8 615 aaPredicted RBP13.6□□□□□ -0.23
LSM2-208ENST00000375661 MBOAT7Q96N66 472 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 GCOM2Q9BZD3 368 aaPredicted RBP13.6□□□□□ -0.23
LSM2-208ENST00000375661 INO80BQ9C086 356 aaPredicted RBP13.6□□□□□ -0.23
LSM2-208ENST00000375661 SFXN1Q9H9B4 322 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 DISC1Q9NRI5 854 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 MTMR6Q9Y217 621 aa13.6□□□□□ -0.23
LSM2-208ENST00000375661 TDP2O95551 362 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 ASGR2P07307 311 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 SFPQP23246 707 aaKnown RBP eCLIP13.59□□□□□ -0.23
LSM2-208ENST00000375661 CA8P35219 290 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 PHKA2P46019 1235 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 PRKCEQ02156 737 aa13.59□□□□□ -0.23
LSM2-208ENST00000375661 TARBP2Q15633 366 aaKnown RBP13.59□□□□□ -0.23
LSM2-208ENST00000375661 LETM2Q2VYF4 491 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms