RNA–Protein interactions for RNA: ENST00000375244.7

TNXB-201, Transcript of tenascin XB, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNXB, Length 13,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-201ENST00000375244 ARHGAP18Q8N392 663 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 ADAMTS1Q9UHI8 967 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 LAMC1P11047 1609 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 CHUKO15111 745 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 MMP1P03956 469 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 KRT72Q14CN4 511 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 CEP78Q5JTW2 689 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 DDIASQ8IXT1 998 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 MIF4GDA9UHW6 222 aaKnown RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 RASSF10A6NK89 507 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 HOXA13P31271 388 aaPredicted RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 RAD23BP54727 409 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 ALKBH5Q6P6C2 394 aaKnown RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 PPM1NQ8N819 430 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 MPP6Q9NZW5 540 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 A0A087WWV3 80 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 NEMP1O14524 444 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 HNRNPRO43390 633 aaKnown RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 VCAM1P19320 739 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 S100A5P33763 92 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 ARL6IP4Q66PJ3 421 aaKnown RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 RAB42Q8N4Z0 105 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 GIMAP8Q8ND71 665 aaPredicted RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 ZNF555Q8NEP9 628 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 AFG1LQ8WV93 481 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 GFM2Q969S9 779 aaKnown RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 COA7Q96BR5 231 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 KDM4CQ9H3R0 1056 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 ATP11BQ9Y2G3 1177 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 MEFVO15553 781 aaPredicted RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 BMP3P12645 472 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 TOGARAM2Q6ZUX3 1019 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 LINC00301Q8NCQ3 95 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 PBXIP1Q96AQ6 731 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 RANBP1P43487 201 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 CAPRIN2Q6IMN6 1127 aaKnown RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 FASTKD5Q7L8L6 764 aaKnown RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 PROM2Q8N271 834 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 MXD3Q9BW11 206 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 FAM49AQ9H0Q0 323 aaPredicted RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
TNXB-201ENST00000375244 ANKS3Q6ZW76 656 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 PCDHGB4Q9UN71 923 aa11.31□□□□□ -0.6
TNXB-201ENST00000375244 KIF23Q02241 960 aaPredicted RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 SNF8Q96H20 258 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 SNX24Q9Y343 169 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 APOL1O14791 398 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 KCNA2P16389 499 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 MB21D1Q8N884 522 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 TRIM54Q9BYV2 358 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 ZNF711Q9Y462 761 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 PRPF4O43172 522 aaKnown RBP eCLIP11.3□□□□□ -0.63e-8■■■■□ 25.8
TNXB-201ENST00000375244 IMPDH2P12268 514 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 UBE3AQ05086 875 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 ADCK1Q86TW2 530 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 URGCPQ8TCY9 931 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 MAD2L2Q9UI95 211 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 TTC7AQ9ULT0 858 aaPredicted RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 CLASP1Q7Z460 1538 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 H0YC42 278 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 TBXAS1P24557 533 aaPredicted RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 INPP5AQ14642 412 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 CDR2LQ86X02 465 aaPredicted RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 MFN1Q8IWA4 741 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 ORC4O43929 436 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 DEAF1O75398 565 aaPredicted RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 GPC5P78333 572 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 MYO1CO00159 1063 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 SRGAP2O75044 1071 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 NLRP14Q86W24 1093 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 ZNF564Q8TBZ8 553 aaPredicted RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 BRIP1Q9BX63 1249 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 GDAQ9Y2T3 454 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 PCDHB6Q9Y5E3 794 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 ABCC2Q92887 1545 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 SLC27A3Q5K4L6 730 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 CC2D2BQ6DHV5 1058 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 DHX36Q9H2U1 1008 aaKnown RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 TMEM161AQ9NX61 479 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 KIF20BQ96Q89 1820 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 ITPRIPL1Q6GPH6 555 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 SH3GLB2Q9NR46 395 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 CEP72Q9P209 647 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 FAM32AQ9Y421 112 aaKnown RBP11.3□□□□□ -0.6
TNXB-201ENST00000375244 NNMTP40261 264 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 PRAMEP78395 509 aa11.3□□□□□ -0.6
TNXB-201ENST00000375244 DDX42Q86XP3 938 aaKnown RBP eCLIP11.3□□□□□ -0.6
TNXB-201ENST00000375244 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
TNXB-201ENST00000375244 CASS4Q9NQ75 786 aa11.29□□□□□ -0.6
TNXB-201ENST00000375244 FARP1Q9Y4F1 1045 aaPredicted RBP11.29□□□□□ -0.6
TNXB-201ENST00000375244 CCDC78A2IDD5 438 aa11.29□□□□□ -0.6
TNXB-201ENST00000375244 GOLGA8IPA6NC78 632 aa11.29□□□□□ -0.6
TNXB-201ENST00000375244 GOLGA8JA6NMD2 632 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms