RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 AATFQ9NY61 560 aaKnown RBP eCLIP9.78□□□□□ -0.84
UBR4-201ENST00000375218 MINDY4BA8MYZ0 360 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 SMPD2O60906 423 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 HEXBP07686 556 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 ANXA13P27216 316 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 GNA15P30679 374 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 CCDC38Q502W7 563 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 INTS11Q5TA45 600 aaKnown RBP9.78□□□□□ -0.84
UBR4-201ENST00000375218 B4GALNT4Q76KP1 1039 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 CCDC33Q8N5R6 958 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 C3orf20Q8ND61 904 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 DNAJB8Q8NHS0 232 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 VPS50Q96JG6 964 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 DDX50Q9BQ39 737 aaKnown RBP9.78□□□□□ -0.84
UBR4-201ENST00000375218 SLC52A2Q9HAB3 445 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 ANO9A1A5B4 782 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 ADH7P40394 386 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 MINDY4Q4G0A6 757 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 EPM2AIP1Q7L775 607 aaPredicted RBP9.78□□□□□ -0.84
UBR4-201ENST00000375218 TTC39CQ8N584 583 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 KCNH5Q8NCM2 988 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 OR52K2Q8NGK3 314 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 TRIM4Q9C037 500 aa9.78□□□□□ -0.84
UBR4-201ENST00000375218 PLEKHG2Q9H7P9 1386 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 UTYO14607 1347 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 MEN1O00255 615 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
UBR4-201ENST00000375218 ZEB2O60315 1214 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 TSPAN1O60635 241 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 SEC31AO94979 1220 aaKnown RBP9.77□□□□□ -0.85
UBR4-201ENST00000375218 ADSLP30566 484 aaPredicted RBP9.77□□□□□ -0.85
UBR4-201ENST00000375218 PTGS2P35354 604 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 TUBP50607 506 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 TKTL1P51854 596 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 GNAI1P63096 354 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 KIF12Q96FN5 646 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 CATSPER2Q96P56 530 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 RASSF1Q9NS23 344 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 EIF3CLB5ME19 914 aaKnown RBP9.77□□□□□ -0.85
UBR4-201ENST00000375218 HAAOP46952 286 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 CETN1Q12798 172 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 CUL2Q13617 745 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 KRT32Q14532 448 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 GCC1Q96CN9 775 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 CMTM3Q96MX0 182 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 EIF3CQ99613 913 aaKnown RBP9.77□□□□□ -0.85
UBR4-201ENST00000375218 RBCK1Q9BYM8 510 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 NKIRAS2Q9NYR9 191 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.77□□□□□ -0.85
UBR4-201ENST00000375218 DKK3Q9UBP4 350 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 PCDHGC5Q9Y5F6 944 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 MYH7P12883 1935 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 FAM221AA4D161 298 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 SOCS5O75159 536 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 OFD1O75665 1012 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 STARD3NLO95772 234 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 GSK3AP49840 483 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 DIO1P49895 249 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 ACY1Q03154 408 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 NR6A1Q15406 480 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 CRY1Q16526 586 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 C2orf27AQ580R0 203 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 SLC30A6Q6NXT4 461 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 ZNF483Q8TF39 744 aaPredicted RBP9.77□□□□□ -0.85
UBR4-201ENST00000375218 CCDC106Q9BWC9 280 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 AASSQ9UDR5 926 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 MTRF1LQ9UGC7 380 aaKnown RBP9.77□□□□□ -0.85
UBR4-201ENST00000375218 ATPIF1Q9UII2 106 aa9.77□□□□□ -0.85
UBR4-201ENST00000375218 KIAA1551Q9HCM1 1747 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 ENO4A6NNW6 628 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 TEX28O15482 410 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 USO1O60763 962 aaKnown RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 CDC16Q13042 620 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 BMPR2Q13873 1038 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 TAF7Q15545 349 aaPredicted RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 NFKBIBQ15653 356 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 MEA1Q16626 185 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 SWI5Q1ZZU3 235 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 IGSF11Q5DX21 431 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 ATG9AQ7Z3C6 839 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 LURAP1LQ8IV03 231 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 SYNE4Q8N205 404 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 CNTD1Q8N815 330 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 HIC2Q96JB3 615 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 ZCWPW1Q9H0M4 648 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 EHMT1Q9H9B1 1298 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 A0A0G2JPF8 293 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 HNRNPCL3B7ZW38 293 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 INO80B-WBP1J3KQ70 363 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 HNRNPCL4P0DMR1 293 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 GNL1P36915 607 aaPredicted RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 Q4G0T1 1027 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 FBXW10Q5XX13 1052 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 LRSAM1Q6UWE0 723 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 NAF1Q96HR8 494 aaKnown RBP9.76□□□□□ -0.85
UBR4-201ENST00000375218 PSKH2Q96QS6 385 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 ZPBPQ9BS86 351 aa9.76□□□□□ -0.85
UBR4-201ENST00000375218 TNKS2Q9H2K2 1166 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms