RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 KLHL30Q0D2K2 578 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SLC18A3Q16572 532 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 MTERF2Q49AM1 385 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CBWD6Q4V339 395 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CBWD3Q5JTY5 395 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CBWD5Q5RIA9 395 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 FAM160B1Q5W0V3 765 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 IFT74Q96LB3 600 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CEP89Q96ST8 783 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 PCYT2Q99447 389 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 POLR3FQ9H1D9 316 aaPredicted RBP19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 PCIF1Q9H4Z3 704 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 LUC7LQ9NQ29 371 aaKnown RBP19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ARHGAP28Q9P2N2 729 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TFR2Q9UP52 801 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 PPME1Q9Y570 386 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 MAGEA1P43355 309 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 VAMP7P51809 220 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 POLGP54098 1239 aaPredicted RBP19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ENPEPQ07075 957 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 IQCEQ6IPM2 695 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SECISBP2LQ93073 1101 aaKnown RBP19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 DDX41Q9UJV9 622 aaKnown RBP19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ATP8B3O60423 1300 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ADGRA3Q8IWK6 1321 aa19.62■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ANO9A1A5B4 782 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 GGPS1O95749 300 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 PGK2P07205 417 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CETPP11597 493 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ADSSP30520 456 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 RFC5P40937 340 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SOX10P56693 466 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 GFPT1Q06210 699 aaPredicted RBP19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TARBP2Q15633 366 aaKnown RBP19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ELF2Q15723 593 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 FMNL3Q8IVF7 1028 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SEPT1Q8WYJ6 367 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 KIFC3Q9BVG8 833 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 INTS2Q9H0H0 1204 aaKnown RBP19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 PORCNQ9H237 461 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 AJAP1Q9UKB5 411 aaPredicted RBP19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CLEC11AQ9Y240 323 aa19.61■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ANKRD63C9JTQ0 380 aa19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CNGA1P29973 690 aa19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 WHAMMP3Q1A5X7 153 aa19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 BRDTQ58F21 947 aaPredicted RBP19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CEP112Q8N8E3 955 aa19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 FAM167AQ96KS9 214 aa19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 FBXL18Q96ME1 805 aa19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 NRBP2Q9NSY0 501 aa19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 USP20Q9Y2K6 914 aa19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 V9GYY5 206 aaPredicted RBP19.6■□□□□ 0.73
HLA-DQB1-201ENST00000374943 POTEJP0CG39 1038 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 FERP16591 822 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 GARTP22102 1010 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ARL2P36404 184 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 GTF2A2P52657 109 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ERCC6LQ2NKX8 1250 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 C1orf220Q5T0J3 134 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 C10orf76Q5T2E6 689 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 PAPD7Q5XG87 772 aaKnown RBP19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 MAP1SQ66K74 1059 aaPredicted RBP19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SLC39A4Q6P5W5 647 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TRAPPC11Q7Z392 1133 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 RDH13Q8NBN7 331 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TRIM58Q8NG06 486 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 LMO3Q8TAP4 145 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 UBXN4Q92575 508 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 MS4A4AQ96JQ5 239 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 STK33Q9BYT3 514 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 APEX2Q9UBZ4 518 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 DUSP10Q9Y6W6 482 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 EMSYQ7Z589 1322 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 LGR5O75473 907 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ARIH2O95376 493 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TCF7P36402 384 aaPredicted RBP19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 STAT1P42224 750 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 NAMPTP43490 491 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 STAT5BP51692 787 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 APLP1P51693 650 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CCNA1P78396 465 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CETN1Q12798 172 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 EPC2Q52LR7 807 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 CELF3Q5SZQ8 465 aaKnown RBP19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 RSRC2Q7L4I2 434 aaKnown RBP19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TAS1R3Q7RTX0 852 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SRGAP1Q7Z6B7 1085 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 GPIHBP1Q8IV16 184 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 RNF10Q8N5U6 811 aaKnown RBP19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 SLC7A3Q8WY07 619 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 VTI1AQ96AJ9 217 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 MLXIPQ9HAP2 919 aa19.59■□□□□ 0.73
HLA-DQB1-201ENST00000374943 TRPM7Q96QT4 1865 aa19.58■□□□□ 0.73
HLA-DQB1-201ENST00000374943 ASB14A6NK59 587 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 F8VZ95 297 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TACC1O75410 805 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 GFPT2O94808 682 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 TOMM70O94826 608 aa19.58■□□□□ 0.72
HLA-DQB1-201ENST00000374943 ADRB2P07550 413 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms