RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 CYP4A11Q02928 519 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 CKAP4Q07065 602 aaKnown RBP16.99■□□□□ 0.31
CCDC40-202ENST00000374876 TTLL4Q14679 1199 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 TERF2Q15554 542 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 DUSP28Q4G0W2 176 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 CCDC62Q6P9F0 684 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 NOA1Q8NC60 698 aaKnown RBP16.99■□□□□ 0.31
CCDC40-202ENST00000374876 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 REEP2Q9BRK0 252 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 FUT8Q9BYC5 575 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 BCAS3Q9H6U6 928 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 SRGAP2O75044 1071 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 TACC1O75410 805 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 ZC3H3Q8IXZ2 948 aaKnown RBP16.99■□□□□ 0.31
CCDC40-202ENST00000374876 INPP4AQ96PE3 977 aaPredicted RBP16.99■□□□□ 0.31
CCDC40-202ENST00000374876 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
CCDC40-202ENST00000374876 POLR3CQ9BUI4 534 aaPredicted RBP16.99■□□□□ 0.31
CCDC40-202ENST00000374876 LSM14BQ9BX40 385 aaKnown RBP16.99■□□□□ 0.31
CCDC40-202ENST00000374876 NLRC4Q9NPP4 1024 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 JADE2Q9NQC1 790 aa16.99■□□□□ 0.31
CCDC40-202ENST00000374876 MYADML2A6NDP7 307 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 C6orf222P0C671 652 aaPredicted RBP16.98■□□□□ 0.31
CCDC40-202ENST00000374876 NR2F2P24468 414 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 CASP5P51878 434 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 TDRD12Q587J7 1177 aaKnown RBP16.98■□□□□ 0.31
CCDC40-202ENST00000374876 XRRA1Q6P2D8 792 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 TLK2Q86UE8 772 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 SFR1Q86XK3 245 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 GPIHBP1Q8IV16 184 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 TXLNBQ8N3L3 684 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 RPGRIP1Q96KN7 1286 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 CAPZA3Q96KX2 299 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 BHMT2Q9H2M3 363 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 UBIAD1Q9Y5Z9 338 aa16.98■□□□□ 0.31
CCDC40-202ENST00000374876 SSU72P8A0A1W2PR75 194 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 TBCAO75347 108 aaKnown RBP16.97■□□□□ 0.31
CCDC40-202ENST00000374876 STAM2O75886 525 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 BEX3Q00994 111 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
CCDC40-202ENST00000374876 SFMBT2Q5VUG0 894 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 ZNF771Q7L3S4 317 aaPredicted RBP16.97■□□□□ 0.31
CCDC40-202ENST00000374876 CAGE1Q8TC20 777 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 DIS3LQ8TF46 1054 aaKnown RBP16.97■□□□□ 0.31
CCDC40-202ENST00000374876 SYN2Q92777 582 aaPredicted RBP16.97■□□□□ 0.31
CCDC40-202ENST00000374876 MMS19Q96T76 1030 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 MXRA8Q9BRK3 442 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 CRACR2AQ9BSW2 395 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 GBP3Q9H0R5 595 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 PKD2L1Q9P0L9 805 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 JRKLQ9Y4A0 524 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 IGLV3-22A0A075B6J6 115 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 SPATA31C2B4DYI2 1134 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 ADAMTS4O75173 837 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 NOL4O94818 638 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 EYA4O95677 639 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 MAGEA1P43355 309 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
CCDC40-202ENST00000374876 POLR2FP61218 127 aaKnown RBP16.97■□□□□ 0.31
CCDC40-202ENST00000374876 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
CCDC40-202ENST00000374876 GNPTABQ3T906 1256 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 NLRX1Q86UT6 975 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 KCTD17Q8N5Z5 321 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 TRAF3IP3Q9Y228 551 aa16.97■□□□□ 0.31
CCDC40-202ENST00000374876 EML1O00423 815 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 CALUO43852 315 aaPredicted RBP16.96■□□□□ 0.31
CCDC40-202ENST00000374876 ATP9AO75110 1047 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 GJA9P57773 515 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 VSNL1P62760 191 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 MTMR1Q13613 665 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 SMC1AQ14683 1233 aaKnown RBP16.96■□□□□ 0.31
CCDC40-202ENST00000374876 CEP55Q53EZ4 464 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 GNASQ5JWF2 1037 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 BEND6Q5SZJ8 279 aaPredicted RBP16.96■□□□□ 0.31
CCDC40-202ENST00000374876 EPM2AIP1Q7L775 607 aaPredicted RBP16.96■□□□□ 0.31
CCDC40-202ENST00000374876 ARRDC4Q8NCT1 418 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 ALS2CR12Q96Q35 445 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 RGL1Q9NZL6 768 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 FRMPD3Q5JV73 1810 aa16.96■□□□□ 0.31
CCDC40-202ENST00000374876 SERPING1P05155 500 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 ARP10275 920 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 ICAM3P32942 547 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 GFPT1Q06210 699 aaPredicted RBP16.96■□□□□ 0.3
CCDC40-202ENST00000374876 ASTE1Q2TB18 679 aaPredicted RBP16.96■□□□□ 0.3
CCDC40-202ENST00000374876 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 HGSNATQ68CP4 663 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 HDXQ7Z353 690 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 OR6J1Q8NGC5 347 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 PAWRQ96IZ0 340 aaKnown RBP16.96■□□□□ 0.3
CCDC40-202ENST00000374876 RUSC1Q9BVN2 902 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 MLXIPQ9HAP2 919 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 ABCB6Q9NP58 842 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 KCNH7Q9NS40 1196 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 ARMCX3Q9UH62 379 aaPredicted RBP16.96■□□□□ 0.3
CCDC40-202ENST00000374876 CAPN6Q9Y6Q1 641 aa16.96■□□□□ 0.3
CCDC40-202ENST00000374876 PDXKO00764 312 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
CCDC40-202ENST00000374876 MOCS3O95396 460 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 MYBP10242 640 aa16.95■□□□□ 0.3
CCDC40-202ENST00000374876 TGFB3P10600 412 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms