RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 C8orf37Q96NL8 207 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 TTC37Q6PGP7 1564 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 SNTNA6NMZ2 147 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 CHRNA3P32297 505 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 HADHAP40939 763 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ORC2Q13416 577 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 TFDP2Q14188 446 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 LRRC8EQ6NSJ5 796 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 RASSF3Q86WH2 238 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 RMDN1Q96DB5 314 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 AP5M1Q9H0R1 490 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 EPS8L2Q9H6S3 715 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 NFKBIL1Q9UBC1 381 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ICE1Q9Y2F5 2266 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 RASSF9O75901 435 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 CSTF3Q12996 717 aaKnown RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 SYCP2LQ5T4T6 812 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 FAM129AQ9BZQ8 928 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ADNPQ9H2P0 1102 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 SLC52A2Q9HAB3 445 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 AURKCQ9UQB9 309 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 SOWAHDA6NJG2 315 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ZFP42Q96MM3 310 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 DNAJC6O75061 913 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 CDC27P30260 824 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 MAGOHP61326 146 aaKnown RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 APOA5Q6Q788 366 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 KIAA1586Q9HCI6 787 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ABCC4O15439 1325 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 C5orf58C9J3I9 102 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 UBE3CQ15386 1083 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ABCB5Q2M3G0 1257 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 TOGARAM2Q6ZUX3 1019 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 SETD3Q86TU7 594 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 SH3GLB2Q9NR46 395 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 GSPT1P15170 499 aaKnown RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 FAM47AQ5JRC9 791 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 THEM5Q8N1Q8 247 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 HEXIM2Q96MH2 286 aaKnown RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 KDM5CP41229 1560 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 LRRIQ1Q96JM4 1722 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 NUP62P37198 522 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ARFIP2P53365 341 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ADRM1Q16186 407 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 KYAT1Q16773 422 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 TSPYL6Q8N831 410 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ATP6V1G3Q96LB4 118 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 DDX50Q9BQ39 737 aaKnown RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 RP1P56715 2156 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 CIAO1O76071 339 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 PCYOX1LQ8NBM8 494 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 GPKOWQ92917 476 aaPredicted RBP eCLIP8.88□□□□□ -0.991e-12■□□□□ 9.1
HSPG2-203ENST00000374695 KRCC1Q9NPI7 259 aaPredicted RBP8.88□□□□□ -0.99
HSPG2-203ENST00000374695 MAN1B1Q9UKM7 699 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ERICH1Q86X53 443 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 ARL2BPQ9Y2Y0 163 aa8.88□□□□□ -0.99
HSPG2-203ENST00000374695 TNPO2O14787 897 aaKnown RBP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 TNFAIP2Q03169 654 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 FBXO38Q6PIJ6 1188 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 FOPNLQ96NB1 174 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ASCC2Q9H1I8 757 aaPredicted RBP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 CEP72Q9P209 647 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ERBB4Q15303 1308 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 MFAP3LO75121 409 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ZNF18P17022 549 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 GGCXP38435 758 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 NSUN2Q08J23 767 aaKnown RBP eCLIP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 INAQ16352 499 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ACAP3Q96P50 834 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 LRFN2Q9ULH4 789 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 LRRIQ3A6PVS8 624 aaPredicted RBP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 SOX6P35712 828 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 FAM173BQ6P4H8 233 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 KCNK16Q96T55 309 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ABCB6Q9NP58 842 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 MBD2Q9UBB5 411 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ADCY1Q08828 1119 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 LBRQ14739 615 aaKnown RBP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 SMARCAL1Q9NZC9 954 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 CNGA2Q16280 664 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 AGGF1Q8N302 714 aaeCLIP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 HSPH1Q92598 858 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ETNK1Q9HBU6 452 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ATG3Q9NT62 314 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 SCN3BQ9NY72 215 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ANAPC7Q9UJX3 599 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 CLIC4Q9Y696 253 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 RPAP1Q9BWH6 1393 aaPredicted RBP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 LDHAP00338 332 aaKnown RBP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 CCDC142Q17RM4 750 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 MFN1Q8IWA4 741 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 ELMOD1Q8N336 334 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.87□□□□□ -0.997e-7■■■■□ 21.8
HSPG2-203ENST00000374695 AP1M1Q9BXS5 423 aa8.87□□□□□ -0.99
HSPG2-203ENST00000374695 TCOF1Q13428 1488 aaKnown RBP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 AFDNP55196 1824 aaKnown RBP8.87□□□□□ -0.99
HSPG2-203ENST00000374695 WDR62O43379 1518 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms