RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TKFCQ3LXA3 575 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 GLE1Q53GS7 698 aaKnown RBP18.49■□□□□ 0.55
RXRB-201ENST00000374680 C2CD6Q53TS8 623 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 HAUS6Q7Z4H7 955 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 CBWD2Q8IUF1 395 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 LRRC4CQ9HCJ2 640 aa18.49■□□□□ 0.55
RXRB-201ENST00000374680 SMIM23A6NLE4 172 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 VAMP7P51809 220 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 PRKG1Q13976 671 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 LMBRD2Q68DH5 695 aaPredicted RBP18.48■□□□□ 0.55
RXRB-201ENST00000374680 IQCKQ8N0W5 287 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 SUPT20HQ8NEM7 779 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 RNPC3Q96LT9 517 aaKnown RBP18.48■□□□□ 0.55
RXRB-201ENST00000374680 FEZ2Q9UHY8 353 aaPredicted RBP18.48■□□□□ 0.55
RXRB-201ENST00000374680 FEM1BQ9UK73 627 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 SGPL1O95470 568 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 RARRES1P49788 294 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 SAMD7Q7Z3H4 446 aa18.48■□□□□ 0.55
RXRB-201ENST00000374680 RPUSD2Q8IZ73 545 aaKnown RBP18.48■□□□□ 0.55
RXRB-201ENST00000374680 TAF1DQ9H5J8 278 aaPredicted RBP18.48■□□□□ 0.55
RXRB-201ENST00000374680 CYP26A1O43174 497 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 P4HBP07237 508 aaKnown RBP18.47■□□□□ 0.55
RXRB-201ENST00000374680 DLATP10515 647 aaKnown RBP18.47■□□□□ 0.55
RXRB-201ENST00000374680 YWHABP31946 246 aaKnown RBP18.47■□□□□ 0.55
RXRB-201ENST00000374680 SEC24CP53992 1094 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 MTMR2Q13614 643 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 C10orf76Q5T2E6 689 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 SCFD2Q8WU76 684 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 LMBR1Q8WVP7 490 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 KRT35Q92764 455 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 CAVIN3Q969G5 261 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 PBKQ96KB5 322 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 RMDN3Q96TC7 470 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 ERVK-5Q9HDB9 667 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 HSPBP1Q9NZL4 362 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 STK24Q9Y6E0 443 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 ANKRD63C9JTQ0 380 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 GOLGA8KD6RF30 607 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 DHX15O43143 795 aaKnown RBP18.47■□□□□ 0.55
RXRB-201ENST00000374680 PEX10O60683 326 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 ASNSP08243 561 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 TNIP1Q15025 636 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 DCAF12L1Q5VU92 463 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 ALS2CLQ60I27 953 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 SLC30A5Q8TAD4 765 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 CLEC4DQ8WXI8 215 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 DHX38Q92620 1227 aaKnown RBP18.47■□□□□ 0.55
RXRB-201ENST00000374680 ALG3Q92685 438 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 GMLQ99445 158 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 PI4K2AQ9BTU6 479 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 DMAC2Q9NW81 257 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 RIPK3Q9Y572 518 aa18.47■□□□□ 0.55
RXRB-201ENST00000374680 QARSP47897 775 aaKnown RBP18.46■□□□□ 0.55
RXRB-201ENST00000374680 ZNF131P52739 623 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 ODF2Q5BJF6 829 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 FAM160B2Q86V87 743 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 NIM1KQ8IY84 436 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 PRPF38AQ8NAV1 312 aaKnown RBP18.46■□□□□ 0.55
RXRB-201ENST00000374680 SYTL5Q8TDW5 730 aaPredicted RBP18.46■□□□□ 0.55
RXRB-201ENST00000374680 STK32BQ9NY57 414 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 FBXL5Q9UKA1 691 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 PPFIA4O75335 1185 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 ICAM1P05362 532 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 LMNB1P20700 586 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 CTNNA1P35221 906 aaKnown RBP18.46■□□□□ 0.55
RXRB-201ENST00000374680 HSD17B3P37058 310 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 OLIG1Q8TAK6 271 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 AGPAT1Q99943 283 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 ATP8A1Q9Y2Q0 1164 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 SLC26A4O43511 780 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 SLC47A2Q86VL8 602 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 SH3GL2Q99962 352 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 AGO4Q9HCK5 861 aaKnown RBP18.46■□□□□ 0.55
RXRB-201ENST00000374680 ODF2LQ9ULJ1 636 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 GJA3Q9Y6H8 435 aa18.46■□□□□ 0.55
RXRB-201ENST00000374680 ADRB2P07550 413 aa18.45■□□□□ 0.54
RXRB-201ENST00000374680 RFFLQ8WZ73 363 aa18.45■□□□□ 0.54
RXRB-201ENST00000374680 PPANQ9NQ55 473 aaKnown RBP18.45■□□□□ 0.54
RXRB-201ENST00000374680 TMEM59LQ9UK28 342 aa18.45■□□□□ 0.54
RXRB-201ENST00000374680 SNX24Q9Y343 169 aa18.45■□□□□ 0.54
RXRB-201ENST00000374680 ALG6Q9Y672 507 aa18.45■□□□□ 0.54
RXRB-201ENST00000374680 PTGER2P43116 358 aa18.45■□□□□ 0.54
RXRB-201ENST00000374680 SETQ01105 290 aaPredicted RBP18.45■□□□□ 0.54
RXRB-201ENST00000374680 DHX9Q08211 1270 aaKnown RBP18.45■□□□□ 0.54
RXRB-201ENST00000374680 TRAF1Q13077 416 aa18.45■□□□□ 0.54
RXRB-201ENST00000374680 ZKSCAN4Q969J2 545 aaPredicted RBP18.45■□□□□ 0.54
RXRB-201ENST00000374680 CCNE2O96020 404 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 GUCY2CP25092 1073 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 BAATQ14032 418 aaPredicted RBP18.44■□□□□ 0.54
RXRB-201ENST00000374680 UAP1Q16222 522 aaPredicted RBP18.44■□□□□ 0.54
RXRB-201ENST00000374680 ARHGEF16Q5VV41 709 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 XXYLT1Q8NBI6 393 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 LMO3Q8TAP4 145 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 ACTRT1Q8TDG2 376 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 SEMA4DQ92854 862 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 PCDHB18PQ96TA0 734 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 SEL1LQ9UBV2 794 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 STXBP5LQ9Y2K9 1186 aa18.44■□□□□ 0.54
RXRB-201ENST00000374680 PTPN22Q9Y2R2 807 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms