RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 BAIAP3O94812 1187 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 MYL1P05976 194 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 ACTN1P12814 892 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 LIG1P18858 919 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 AFMP43652 599 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 MBTD1Q05BQ5 628 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 NFX1Q12986 1120 aaKnown RBP16.58■□□□□ 0.24
HSPG2-201ENST00000374673 TCTN1Q2MV58 587 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 PRPF38BQ5VTL8 546 aaKnown RBP16.58■□□□□ 0.24
HSPG2-201ENST00000374673 KCNN1Q92952 543 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 TIGD1Q96MW7 591 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 FTHL17Q9BXU8 183 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 UBE2OQ9C0C9 1292 aaKnown RBP16.58■□□□□ 0.24
HSPG2-201ENST00000374673 PRO3102Q9H379 93 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 KMT5AQ9NQR1 393 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 ARHGAP28Q9P2N2 729 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 SEL1LQ9UBV2 794 aa16.58■□□□□ 0.24
HSPG2-201ENST00000374673 PTPRSQ13332 1948 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 PHLPP2Q6ZVD8 1323 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 ABHD14A-ACY1A0A1B0GW23 586 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 CCDC169A6NNP5 214 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 GOLGA6L22H0YM25 854 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 INO80B-WBP1J3KQ70 363 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 TRAK2O60296 914 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 EFCAB14O75071 495 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 NR1I2O75469 434 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 CSDE1O75534 798 aaKnown RBP16.57■□□□□ 0.24
HSPG2-201ENST00000374673 GAP43P17677 238 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 FGFR4P22455 802 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 EFNA5P52803 228 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 SMTNP53814 917 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 NCKAP1LP55160 1127 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 IKBKEQ14164 716 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 KANK3Q6NY19 840 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 MYCT1Q8N699 235 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 HERVK_113Q902F9 699 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 CCDC34Q96HJ3 373 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 FIZ1Q96SL8 496 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 KIFC3Q9BVG8 833 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 CCDC113Q9H0I3 377 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 TMEM134Q9H6X4 195 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 LMBRD1Q9NUN5 540 aa16.57■□□□□ 0.24
HSPG2-201ENST00000374673 H0YCG3 227 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 RBAK-RBAKDNI3L0D1 243 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 GTPBP6O43824 516 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-201ENST00000374673 MAPTP10636 758 aaKnown RBP16.56■□□□□ 0.24
HSPG2-201ENST00000374673 IDEP14735 1019 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 ASIC1P78348 528 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 CUL4BQ13620 913 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 FAM187BQ17R55 369 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 C9orf50Q5SZB4 431 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 RASIP1Q5U651 963 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 UNC13DQ70J99 1090 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 OTOP2Q7RTS6 562 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 CATSPER4Q7RTX7 472 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 SFR1Q86XK3 245 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 CCDC65Q8IXS2 484 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 GRAMD1CQ8IYS0 662 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 SLC17A8Q8NDX2 589 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 PRIMPOLQ96LW4 560 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 BLZF1Q9H2G9 400 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 MTIF3Q9H2K0 278 aaKnown RBP16.56■□□□□ 0.24
HSPG2-201ENST00000374673 FZD8Q9H461 694 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 ZHX3Q9H4I2 956 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 OLFML3Q9NRN5 406 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 PANK4Q9NVE7 773 aa16.56■□□□□ 0.24
HSPG2-201ENST00000374673 PRMT7Q9NVM4 692 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-201ENST00000374673 PVALEFA0A1B0GWK0 134 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 SLC16A4O15374 487 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 ERLIN2O94905 339 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 SCP2P22307 547 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 CASP1P29466 404 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 AXLP30530 894 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 COASYQ13057 564 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 DSC3Q14574 896 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 SHHQ15465 462 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 MAPK6Q16659 721 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 AMHR2Q16671 573 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 CHRDL2Q6WN34 429 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 FAM178BQ8IXR5 827 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 ELOA2Q8IYF1 753 aaPredicted RBP16.55■□□□□ 0.24
HSPG2-201ENST00000374673 TMEM161BQ8NDZ6 487 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 ST6GALNAC4Q9H4F1 302 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 CHST12Q9NRB3 414 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 AGPAT5Q9NUQ2 364 aa16.55■□□□□ 0.24
HSPG2-201ENST00000374673 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-201ENST00000374673 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-201ENST00000374673 K7ENM7 598 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 K7ERI5 159 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 MGEA5O60502 916 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 TSPAN1O60635 241 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 KINO60870 393 aaKnown RBP16.54■□□□□ 0.24
HSPG2-201ENST00000374673 PRKCBP05771 671 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 ZSCAN20P17040 1043 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-201ENST00000374673 ABCD1P33897 745 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 WDR5P61964 334 aaKnown RBP16.54■□□□□ 0.24
HSPG2-201ENST00000374673 EHHADHQ08426 723 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms