RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.92□□□□□ -0.66
CD28-202ENST00000374481 AIPL1Q9NZN9 384 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 ZNF212Q9UDV6 495 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 CTDP1Q9Y5B0 961 aaPredicted RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 YTHDC2Q9H6S0 1430 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 PDS5AQ29RF7 1337 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 WFS1O76024 890 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 AFPP02771 609 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 ATF7P17544 494 aaPredicted RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 LIFRP42702 1097 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 NUP107P57740 925 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 IFI35P80217 286 aaPredicted RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 CAV1Q03135 178 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 ADRM1Q16186 407 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TMC3Q7Z5M5 1100 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 INPP5DQ92835 1189 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 APOBEC2Q9Y235 224 aaKnown RBP10.92□□□□□ -0.66
CD28-202ENST00000374481 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 NEURL1BA8MQ27 555 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 CBFA2T3O75081 653 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TOM1L1O75674 476 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 CBX6O95503 412 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 SHBGP04278 402 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 PLCG1P19174 1290 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 RAP1GDS1P52306 607 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 PLS1Q14651 629 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 PTPAQ15257 358 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 LIN52Q52LA3 116 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TMC5Q6UXY8 1006 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 CENPUQ71F23 418 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 CCNJLQ8IV13 435 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 IFNL3Q8IZI9 196 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 C4orf33Q8N1A6 199 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 SUPT20HQ8NEM7 779 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TBC1D10AQ9BXI6 508 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 TLR10Q9BXR5 811 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 DTNAQ9Y4J8 743 aa10.92□□□□□ -0.66
CD28-202ENST00000374481 SHROOM2Q13796 1616 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 RTN2O75298 545 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 KITP10721 976 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 ARL6IP4Q66PJ3 421 aaKnown RBP10.91□□□□□ -0.66
CD28-202ENST00000374481 RINLQ6ZS11 566 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 TSHZ1Q6ZSZ6 1077 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 IL17REQ8NFR9 667 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.91□□□□□ -0.66
CD28-202ENST00000374481 PPP1R14BQ96C90 147 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 CNBD2Q96M20 576 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 SERPINB12Q96P63 405 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 PAGR1Q9BTK6 254 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 WWP1Q9H0M0 922 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 SPC25Q9HBM1 224 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 ZBTB21Q9ULJ3 1066 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 RNF17Q9BXT8 1623 aaKnown RBP10.91□□□□□ -0.66
CD28-202ENST00000374481 TTLL1O95922 423 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 USP33Q8TEY7 942 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 LARP4BQ92615 738 aaKnown RBP10.91□□□□□ -0.66
CD28-202ENST00000374481 PGM2Q96G03 612 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 OSBPL8Q9BZF1 889 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 MYLK2Q9H1R3 596 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 CCDC134Q9H6E4 229 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 CTNNAL1Q9UBT7 734 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 CIDEBQ9UHD4 219 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 AFF2P51816 1311 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 A0A1W2PQJ5 194 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 EXOC3O60645 756 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 GCNT3O95395 438 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 BFSP1Q12934 665 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 MTDHQ86UE4 582 aaKnown RBP10.91□□□□□ -0.66
CD28-202ENST00000374481 GLG1Q92896 1179 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 TSSK1BQ9BXA7 367 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 LMCD1Q9NZU5 365 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 HEY2Q9UBP5 337 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 UGGT1Q9NYU2 1555 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 STK36Q9NRP7 1315 aa10.91□□□□□ -0.66
CD28-202ENST00000374481 DEAF1O75398 565 aaPredicted RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 ART3Q13508 389 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 ANKRD40Q6AI12 368 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 NCAPG2Q86XI2 1143 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 RHOT2Q8IXI1 618 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 MB21D2Q8IYB1 491 aaPredicted RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 GALNT4Q8N4A0 578 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 FBXO25Q8TCJ0 367 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 RSAD2Q8WXG1 361 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 AK8Q96MA6 479 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 ZBED2Q9BTP6 218 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 SPATA7Q9P0W8 599 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 MTO1Q9Y2Z2 717 aaKnown RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 PGM3O95394 542 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 PSMG1O95456 288 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 BASP1P80723 227 aaKnown RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 CDCA2Q69YH5 1023 aaPredicted RBP10.9□□□□□ -0.66
CD28-202ENST00000374481 METTL13Q8N6R0 699 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 TRPV6Q9H1D0 765 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 CAAP1Q9H8G2 361 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 SPHKAPQ2M3C7 1700 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 IQGAP1P46940 1657 aa10.9□□□□□ -0.66
CD28-202ENST00000374481 TCHHQ07283 1943 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms