RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 ANO10Q9NW15 660 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SUCLA2Q9P2R7 463 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FAM163BP0C2L3 166 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CYP4A11Q02928 519 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 DMP1Q13316 513 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZSCAN23Q3MJ62 389 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 DCAF4L1Q3SXM0 396 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PLA2G4FQ68DD2 849 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SLFN12LQ6IEE8 588 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TRIM50Q86XT4 487 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CD302Q8IX05 232 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 IFT74Q96LB3 600 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ACCSQ96QU6 501 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 C1orf112Q9NSG2 853 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TBX20Q9UMR3 447 aa12.31□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TRIP12Q14669 1992 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 A0A1B0GUA9 196 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 STAU1O95793 577 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 MCF2P10911 925 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CCNE1P24864 410 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SMTNP53814 917 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PLEKHG4Q58EX7 1191 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SPECC1Q5M775 1068 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TTI2Q6NXR4 508 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 THAP9Q9H5L6 903 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FNDC1Q4ZHG4 1894 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ADGRA3Q8IWK6 1321 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 N4BP3O15049 544 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SELPP16109 830 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 RAB27AP51159 221 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 NPEPPSP55786 919 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PPP2R3AQ06190 1150 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FBXO47Q5MNV8 452 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 UTP14CQ5TAP6 766 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CDKAL1Q5VV42 579 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CXCL17Q6UXB2 119 aa12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 APBB1IPQ7Z5R6 666 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT2-201ENST00000374466 BICDL2A1A5D9 508 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZBTB39O15060 712 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 GNA14O95837 355 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 GTF2H1P32780 548 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PTGISQ16647 500 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 KNOP1Q1ED39 458 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ALKAL1Q6UXT8 129 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 MAP7D2Q96T17 732 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PLEKHA5Q9HAU0 1116 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TBCAO75347 108 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TIMP1P01033 207 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CHRNA1P02708 482 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CKBP12277 381 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZNF18P17022 549 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FILIP1Q7Z7B0 1213 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PRPF31Q8WWY3 499 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ACO2Q99798 780 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 GCOM2Q9BZD3 368 aaPredicted RBP12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 EXOC1Q9NV70 894 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 EVPLQ92817 2033 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TREHO43280 583 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TGFB1I1O43294 461 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CYP2C9P11712 490 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 BMP8BP34820 402 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PNOCQ13519 176 aa12.29□□□□□ -0.44
CSGALNACT2-201ENST00000374466 C1RP00736 705 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 IQCB1Q15051 598 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 MTERF2Q49AM1 385 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SFR1Q86XK3 245 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 GPR65Q8IYL9 337 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 MFSD14AQ96MC6 490 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 RGS18Q9NS28 235 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SETD4Q9NVD3 440 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 A0A0B4J269 797 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FAM13AO94988 1023 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 LRRC55Q6ZSA7 311 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SPATA18Q8TC71 538 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TMC2Q8TDI7 906 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ABHD8Q96I13 439 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 UBN1Q9NPG3 1134 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 EFEMP2O95967 443 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CLTBP09497 229 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ARID5BQ14865 1188 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SARM1Q6SZW1 724 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 MYOCDQ8IZQ8 938 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 PKD2L1Q9P0L9 805 aa12.28□□□□□ -0.44
CSGALNACT2-201ENST00000374466 TSPAN1O60635 241 aa12.27□□□□□ -0.44
CSGALNACT2-201ENST00000374466 LDHAP00338 332 aaKnown RBP12.27□□□□□ -0.44
CSGALNACT2-201ENST00000374466 CCDC192P0DO97 292 aa12.27□□□□□ -0.44
CSGALNACT2-201ENST00000374466 NCAPHQ15003 741 aa12.27□□□□□ -0.44
CSGALNACT2-201ENST00000374466 SLC39A4Q6P5W5 647 aa12.27□□□□□ -0.44
CSGALNACT2-201ENST00000374466 HAUS6Q7Z4H7 955 aa12.27□□□□□ -0.44
CSGALNACT2-201ENST00000374466 ZNF598Q86UK7 904 aaKnown RBP12.27□□□□□ -0.44
CSGALNACT2-201ENST00000374466 MRPL4Q9BYD3 311 aaKnown RBP12.27□□□□□ -0.44
CSGALNACT2-201ENST00000374466 FSD2A1L4K1 749 aa12.27□□□□□ -0.45
CSGALNACT2-201ENST00000374466 GPR182O15218 404 aa12.27□□□□□ -0.45
CSGALNACT2-201ENST00000374466 P4HA2O15460 535 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms