RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 RSRC1Q96IZ7 334 aaKnown RBP16■□□□□ 0.15
COL9A2-202ENST00000372748 COA1Q9GZY4 146 aa16■□□□□ 0.15
COL9A2-202ENST00000372748 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
COL9A2-202ENST00000372748 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 HLA-DOAP06340 250 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
COL9A2-202ENST00000372748 CYP4A11Q02928 519 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 MAPK7Q13164 816 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 ITIH4Q14624 930 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 LLGL1Q15334 1064 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 PRR16Q569H4 304 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 OLIG1Q8TAK6 271 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 P2RX7Q99572 595 aaKnown RBP15.99■□□□□ 0.15
COL9A2-202ENST00000372748 ANO3Q9BYT9 981 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 DNAJC18Q9H819 358 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 COG5Q9UP83 839 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 CCDC189A1A4V9 331 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 TMEM110-MUSTN1A8MSY1 372 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 FOXO6A8MYZ6 492 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 GCNT3O95395 438 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 HOXA10P31260 410 aaPredicted RBP15.99■□□□□ 0.15
COL9A2-202ENST00000372748 RPL21P46778 160 aaKnown RBP15.99■□□□□ 0.15
COL9A2-202ENST00000372748 MARCKSL1P49006 195 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 USH1GQ495M9 461 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 APOBEC3HQ6NTF7 200 aaKnown RBP15.99■□□□□ 0.15
COL9A2-202ENST00000372748 CCDC25Q86WR0 208 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 TTC7AQ9ULT0 858 aaPredicted RBP15.99■□□□□ 0.15
COL9A2-202ENST00000372748 BCS1LQ9Y276 419 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 ASTN1O14525 1302 aa15.99■□□□□ 0.15
COL9A2-202ENST00000372748 A8MUI8 341 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 POLRMTO00411 1230 aaKnown RBP15.98■□□□□ 0.15
COL9A2-202ENST00000372748 FERP16591 822 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 NPEPPSP55786 919 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 PPATQ06203 517 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 DRAP1Q14919 205 aaPredicted RBP15.98■□□□□ 0.15
COL9A2-202ENST00000372748 SLC30A5Q8TAD4 765 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 GRHL1Q9NZI5 618 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 PTPN22Q9Y2R2 807 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 CALUO43852 315 aaPredicted RBP15.98■□□□□ 0.15
COL9A2-202ENST00000372748 ADRA2BP18089 450 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 SP8Q8IXZ3 490 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 DYDC1Q8WWB3 177 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 KRT35Q92764 455 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 TRIM6Q9C030 488 aaPredicted RBP15.98■□□□□ 0.15
COL9A2-202ENST00000372748 CARD9Q9H257 536 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 FGFR1OP2Q9NVK5 253 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 INTUQ9ULD6 942 aa15.98■□□□□ 0.15
COL9A2-202ENST00000372748 GSTA1P08263 222 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 CREB1P16220 341 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 SOX5P35711 763 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 ARHGAP44Q17R89 818 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 KIAA0825Q8IV33 1275 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 KSR1Q8IVT5 923 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 DBNDD1Q9H9R9 158 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 DNAJC12Q9UKB3 198 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 STK38LQ9Y2H1 464 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 ADAMTSL1Q8N6G6 1762 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 PDXKO00764 312 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 RTN2O75298 545 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 LRRN2O75325 713 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 TMEM253P0C7T8 217 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 POLD1P28340 1107 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 ALDH5A1P51649 535 aaPredicted RBP15.97■□□□□ 0.15
COL9A2-202ENST00000372748 RBM5P52756 815 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL9A2-202ENST00000372748 SLFN13Q68D06 897 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 TTC27Q6P3X3 843 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 SLC30A10Q6XR72 485 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 ZDHHC14Q8IZN3 488 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 EBF2Q9HAK2 575 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 C15orf41Q9Y2V0 281 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 LY75O60449 1722 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 DDTLA6NHG4 134 aaPredicted RBP15.97■□□□□ 0.15
COL9A2-202ENST00000372748 ANKRD63C9JTQ0 380 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 IGF2BP3O00425 579 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL9A2-202ENST00000372748 RASGRF2O14827 1237 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 RARAP10276 462 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 NCALDP61601 193 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 IKQ13123 557 aaPredicted RBP15.97■□□□□ 0.15
COL9A2-202ENST00000372748 C6orf118Q5T5N4 469 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 TEKT1Q969V4 418 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 BHMT2Q9H2M3 363 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 ECT2Q9H8V3 914 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 KCNMB3Q9NPA1 279 aa15.97■□□□□ 0.15
COL9A2-202ENST00000372748 PITPNM2Q9BZ72 1349 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 MEIS2O14770 477 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 SNX3O60493 162 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 DIAPH2O60879 1101 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 GDF11O95390 407 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 AGTP01019 485 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 VCAM1P19320 739 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 LMNB1P20700 586 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 AUHQ13825 339 aaKnown RBP15.96■□□□□ 0.15
COL9A2-202ENST00000372748 CNGA2Q16280 664 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 LONRF1Q17RB8 773 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 SPDYCQ5MJ68 293 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 EPM2AIP1Q7L775 607 aaPredicted RBP15.96■□□□□ 0.15
COL9A2-202ENST00000372748 KRT27Q7Z3Y8 459 aa15.96■□□□□ 0.15
COL9A2-202ENST00000372748 SPICE1Q8N0Z3 855 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms