RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 TPX2Q9ULW0 747 aaKnown RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 FRMPD1Q5SYB0 1578 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 TRPA1O75762 1119 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 SYF2O95926 243 aaKnown RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 CXCR5P32302 372 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 ORC2Q13416 577 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 JPH1Q9HDC5 661 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-202ENST00000372216 SCINQ9Y6U3 715 aa10.48□□□□□ -0.73
COL4A6-202ENST00000372216 CYP27A1Q02318 531 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 TSNAXIP1Q2TAA8 658 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 CAPN10Q9HC96 672 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 ITSN1Q15811 1721 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 PGRMC1O00264 195 aaKnown RBP10.47□□□□□ -0.73
COL4A6-202ENST00000372216 PPFIA2O75334 1257 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 DDHD2O94830 711 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 IFNAR2P48551 515 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 HHIPL2Q6UWX4 724 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 VSTM4Q8IW00 320 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
COL4A6-202ENST00000372216 ZNF507Q8TCN5 953 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 NCLNQ969V3 563 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 ZFYVE19Q96K21 471 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-202ENST00000372216 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-202ENST00000372216 ENTPD3O75355 529 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 INPP5BP32019 993 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 THOC1Q96FV9 657 aaKnown RBP10.47□□□□□ -0.73
COL4A6-202ENST00000372216 SCHIP1Q9P0W5 487 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-202ENST00000372216 PYCARDQ9ULZ3 195 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 PRR23AA6NEV1 266 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 ASMTLO95671 621 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 STMN1P16949 149 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 USP11P51784 963 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 ETF1P62495 437 aaKnown RBP10.47□□□□□ -0.73
COL4A6-202ENST00000372216 SLMAPQ14BN4 828 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 TKFCQ3LXA3 575 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 TMEM270Q6UE05 265 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 SAAL1Q96ER3 474 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 PBKQ96KB5 322 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 MTA3Q9BTC8 594 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 RRAGDQ9NQL2 400 aaPredicted RBP10.47□□□□□ -0.73
COL4A6-202ENST00000372216 MTMR4Q9NYA4 1195 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 DAAM1Q9Y4D1 1078 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 ORC6Q9Y5N6 252 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 DIP2BQ9P265 1576 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 PRR29P0C7W0 189 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 CPB1P15086 417 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 FBXL13Q8NEE6 735 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 EDEM3Q9BZQ6 932 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 NEUROG2Q9H2A3 272 aa10.47□□□□□ -0.73
COL4A6-202ENST00000372216 M0QYV0 167 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 HIP1RO75146 1068 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 RBBP7Q16576 425 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 SRBD1Q8N5C6 995 aaKnown RBP10.46□□□□□ -0.73
COL4A6-202ENST00000372216 TEKT4Q8WW24 435 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 SEPT8Q92599 483 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 PP2D1A8MPX8 630 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 YWHABP31946 246 aaKnown RBP10.46□□□□□ -0.73
COL4A6-202ENST00000372216 VAMP7P51809 220 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 LBRQ14739 615 aaKnown RBP10.46□□□□□ -0.73
COL4A6-202ENST00000372216 KNOP1Q1ED39 458 aaKnown RBP10.46□□□□□ -0.73
COL4A6-202ENST00000372216 GOLPH3LQ9H4A5 285 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 NGRNQ9NPE2 291 aaKnown RBP10.46□□□□□ -0.73
COL4A6-202ENST00000372216 PCDHA10Q9Y5I2 948 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 USP42Q9H9J4 1324 aaKnown RBP10.46□□□□□ -0.73
COL4A6-202ENST00000372216 ZMYND10O75800 440 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 HMBSP08397 361 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 ADORA2BP29275 332 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 ARL4DP49703 201 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 ARHGDIAP52565 204 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 ZKSCAN8Q15776 578 aaPredicted RBP10.46□□□□□ -0.73
COL4A6-202ENST00000372216 LPAR1Q92633 364 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 RAD18Q9NS91 495 aa10.46□□□□□ -0.73
COL4A6-202ENST00000372216 ZBED1O96006 694 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 CSF1RP07333 972 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 RASSF2P50749 326 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 GNGT1P63211 74 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 PPP6R3Q5H9R7 873 aaPredicted RBP10.46□□□□□ -0.74
COL4A6-202ENST00000372216 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 TMEM39BQ9GZU3 492 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 FAM217BQ9NTX9 383 aaPredicted RBP10.46□□□□□ -0.74
COL4A6-202ENST00000372216 JRKLQ9Y4A0 524 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 MSH2P43246 934 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 SLCO1A2P46721 670 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 DRP2Q13474 957 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 KCTD16Q68DU8 428 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 LRRC8CQ8TDW0 803 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 LZICQ8WZA0 190 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 UBE4BO95155 1302 aa10.46□□□□□ -0.74
COL4A6-202ENST00000372216 CCL15-CCL14A0A0B4J2E2 113 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CTSHP09668 335 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CYP2B6P20813 491 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 EEF1B2P24534 225 aaKnown RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 PLTPP55058 493 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 BAATQ14032 418 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CCL15Q16663 113 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 C11orf74Q86VG3 221 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 CLEC10AQ8IUN9 316 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 KIF12Q96FN5 646 aa10.45□□□□□ -0.74
COL4A6-202ENST00000372216 NUDCD1Q96RS6 583 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms