RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ZNF658Q5TYW1 1059 aaPredicted RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ARMC3Q5W041 872 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 STX12Q86Y82 276 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 PI4K2BQ8TCG2 481 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 HNRNPH1P31943 449 aaKnown RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 RCN1Q15293 331 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 CEP95Q96GE4 821 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ATXN7L3BQ96GX2 97 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 MPP4Q96JB8 637 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 SEC16BQ96JE7 1060 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 CCDC188H7C350 402 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 IRS4O14654 1257 aaPredicted RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ATP12AP54707 1039 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 FASTKD1Q53R41 847 aaKnown RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ODR4Q5SWX8 454 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 FAM149B1Q96BN6 582 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 CAAP1Q9H8G2 361 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 H2AFY2Q9P0M6 372 aaPredicted RBP16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 SNX24Q9Y343 169 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
GTF3C4-201ENST00000372146 RERGLQ9H628 205 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 DAPK2Q9UIK4 370 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 SOS2Q07890 1332 aaPredicted RBP16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 TK2O00142 265 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 MARK3P27448 753 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 WWP1Q9H0M0 922 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 POTEFA5A3E0 1075 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 STX7O15400 261 aaKnown RBP16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 KIF24Q5T7B8 1368 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 PPP1R2P3Q6NXS1 205 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 GPKOWQ92917 476 aaPredicted RBP eCLIP16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 FAM210AQ96ND0 272 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 AIPL1Q9NZN9 384 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 USP15Q9Y4E8 981 aaPredicted RBP16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 V9GYQ6 96 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 TBKBP1A7MCY6 615 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 ZCCHC18P0CG32 403 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 PRPF39Q86UA1 669 aaKnown RBP16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 SNF8Q96H20 258 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 CNDP1Q96KN2 507 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 UBXN8O00124 270 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 RGS20O76081 388 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 TSSK1BQ9BXA7 367 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 HDHD2Q9H0R4 259 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 ZNF233A6NK53 670 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 IGF2BP3O00425 579 aaKnown RBP eCLIP16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 SMAD1Q15797 465 aaKnown RBP16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 SLC40A1Q9NP59 571 aa16.21■□□□□ 0.19
GTF3C4-201ENST00000372146 MEIS1O00470 390 aa16.21■□□□□ 0.18
GTF3C4-201ENST00000372146 P2RX5Q93086 422 aa16.21■□□□□ 0.18
GTF3C4-201ENST00000372146 LRRC59Q96AG4 307 aaKnown RBP16.21■□□□□ 0.18
GTF3C4-201ENST00000372146 C17orf80Q9BSJ5 609 aa16.21■□□□□ 0.18
GTF3C4-201ENST00000372146 NOL6Q9H6R4 1146 aaKnown RBP16.21■□□□□ 0.18
GTF3C4-201ENST00000372146 EIF2S1P05198 315 aaKnown RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 PLEKHA8Q96JA3 519 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 NSFL1CQ9UNZ2 370 aaKnown RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 SSH2Q76I76 1423 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 ESYT3A0FGR9 886 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 NLRP11P59045 1033 aaKnown RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 ZBED8Q8IZ13 594 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 WDR48Q8TAF3 677 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 ATAD3AQ9NVI7 634 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 HERC5Q9UII4 1024 aaKnown RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 ITGB1BP2Q9UKP3 347 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 HSPA13P48723 471 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 CSTF3Q12996 717 aaKnown RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 CHAMP1Q96JM3 812 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 CATSPER2Q96P56 530 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 MLPHQ9BV36 600 aaPredicted RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 CACNA2D2Q9NY47 1150 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 PCDHA5Q9Y5H7 936 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 GOLGA8TH3BQL2 631 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 UXS1Q8NBZ7 420 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 XAGE2Q96GT9 111 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 CDC40O60508 579 aaKnown RBP eCLIP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 MYO1DO94832 1006 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 CHN1P15882 459 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 AKR1D1P51857 326 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 SLC39A6Q13433 755 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 FAM45BPQ6NSW5 357 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 GRAMD1CQ8IYS0 662 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 SUGCTQ9HAC7 445 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 SAMSN1Q9NSI8 373 aaKnown RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 DSEQ9UL01 958 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 NEMP1O14524 444 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 LCA5LO95447 670 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 CYP2C19P33261 490 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 MDH1P40925 334 aaKnown RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 KRT76Q01546 638 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 ARL13BQ3SXY8 428 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 KLHL24Q6TFL4 600 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 SLC17A8Q8NDX2 589 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 ZSCAN10Q96SZ4 725 aaPredicted RBP16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
GTF3C4-201ENST00000372146 DMAP1Q9NPF5 467 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms