RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CYP26A1O43174 497 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 LCA5LO95447 670 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 CPNE8Q86YQ8 564 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 ACBD3Q9H3P7 528 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 KMT5AQ9NQR1 393 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 AMACRQ9UHK6 382 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 ZNF541Q9H0D2 1346 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 BUB1BO60566 1050 aaPredicted RBP12.75□□□□□ -0.37
PDE6C-201ENST00000371447 KRT14P02533 472 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 MARK3P27448 753 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 ATP1A2P50993 1020 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 MESDQ14696 234 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 WDR93Q6P2C0 686 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 TXLNBQ8N3L3 684 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 SH2D3CQ8N5H7 860 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 METTL13Q8N6R0 699 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 ZNF280CQ8ND82 737 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 PLEKHO2Q8TD55 490 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 ACCSQ96QU6 501 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 FAM213AQ9BRX8 229 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 KIAA1683Q9H0B3 1180 aa12.75□□□□□ -0.37
PDE6C-201ENST00000371447 PJA2O43164 708 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 RAD51CO43502 376 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 ATP8B1O43520 1251 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 TBC1D12O60347 775 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 CTNND1O60716 968 aaKnown RBP12.74□□□□□ -0.37
PDE6C-201ENST00000371447 BACE1P56817 501 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 SF3A3Q12874 501 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDE6C-201ENST00000371447 TTLL12Q14166 644 aaPredicted RBP12.74□□□□□ -0.37
PDE6C-201ENST00000371447 ANO5Q75V66 913 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 ANKRD35Q8N283 1001 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 RNF10Q8N5U6 811 aaKnown RBP12.74□□□□□ -0.37
PDE6C-201ENST00000371447 XXYLT1Q8NBI6 393 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 BSNDQ8WZ55 320 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 APEX2Q9UBZ4 518 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 ADRB2P07550 413 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 PLS3P13797 630 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 MXI1P50539 228 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 CETN1Q12798 172 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 MEI1Q5TIA1 1274 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 MOB2Q70IA6 237 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 MAATS1Q7Z4T9 603 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 STK24Q9Y6E0 443 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 FOCADQ5VW36 1801 aa12.74□□□□□ -0.37
PDE6C-201ENST00000371447 WDR64B1ANS9 1081 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 SLC16A3O15427 465 aaKnown RBP12.73□□□□□ -0.37
PDE6C-201ENST00000371447 KIF4AO95239 1232 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 SGPL1O95470 568 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
PDE6C-201ENST00000371447 FERP16591 822 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 PTPRAP18433 802 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 CYP2C19P33261 490 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 NPTX2P47972 431 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 ACOT2P49753 483 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
PDE6C-201ENST00000371447 TMEM132BQ14DG7 1078 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 PCNX4Q63HM2 1172 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 FOXR1Q6PIV2 292 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
PDE6C-201ENST00000371447 LPAR1Q92633 364 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 SYN2Q92777 582 aaPredicted RBP12.73□□□□□ -0.37
PDE6C-201ENST00000371447 RPGRIP1Q96KN7 1286 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 PPP1R16BQ96T49 567 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 ODF2LQ9ULJ1 636 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 NR2E1Q9Y466 385 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 EIF3DO15371 548 aaKnown RBP eCLIP12.73□□□□□ -0.37
PDE6C-201ENST00000371447 ZNF862O60290 1169 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 FGGP02679 453 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 NF2P35240 595 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 GJC1P36383 396 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 PSMC5P62195 406 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 BMT2Q1RMZ1 405 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 DPY19L2P1Q6NXN4 242 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 OR2W6PQ8NHA6 318 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 TPCN2Q8NHX9 752 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 UHMK1Q8TAS1 419 aaKnown RBP12.73□□□□□ -0.37
PDE6C-201ENST00000371447 PGAP2Q9UHJ9 254 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 UBIAD1Q9Y5Z9 338 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 DNAH12Q6ZR08 3092 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 CNGA1P29973 690 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 SMTNP53814 917 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 SNRNP35Q16560 246 aaKnown RBP12.73□□□□□ -0.37
PDE6C-201ENST00000371447 ZNF662Q6ZS27 426 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 SLC47A2Q86VL8 602 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 BORCS6Q96GS4 357 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 STK33Q9BYT3 514 aa12.73□□□□□ -0.37
PDE6C-201ENST00000371447 SYF2O95926 243 aaKnown RBP12.72□□□□□ -0.37
PDE6C-201ENST00000371447 GUCY2CP25092 1073 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 MCM3P25205 808 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 BIRC3Q13489 604 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 LLGL2Q6P1M3 1020 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 ZNF526Q8TF50 670 aaPredicted RBP12.72□□□□□ -0.37
PDE6C-201ENST00000371447 ZBTB10Q96DT7 871 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 PCDHA10Q9Y5I2 948 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 SMIM23A6NLE4 172 aa12.72□□□□□ -0.37
PDE6C-201ENST00000371447 SSR1P43307 286 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms