RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 ZSWIM4Q9H7M6 989 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 PCDHB12Q9Y5F1 795 aa16.92■□□□□ 0.3
SS18L1-202ENST00000370848 IGKV6-21A0A0C4DH24 114 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 HOXA2O43364 376 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 FGF18O76093 207 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 LAG3P18627 525 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 PDCP20941 246 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 FAM102BQ5T8I3 360 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 COLGALT1Q8NBJ5 622 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 CEP170P1Q96L14 293 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 CYP26B1Q9NR63 512 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 TLR9Q9NR96 1032 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 AKT3Q9Y243 479 aa16.91■□□□□ 0.3
SS18L1-202ENST00000370848 TBKBP1A7MCY6 615 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 PP2D1A8MPX8 630 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 LOC730098B7Z3J9 87 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 TMOD1P28289 359 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
SS18L1-202ENST00000370848 GPC3P51654 580 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 ATP2C1P98194 919 aaPredicted RBP16.9■□□□□ 0.3
SS18L1-202ENST00000370848 ECM1Q16610 540 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 DUSP6Q16828 381 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 POTEGQ6S5H5 508 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 ZNF598Q86UK7 904 aaKnown RBP16.9■□□□□ 0.3
SS18L1-202ENST00000370848 CATSPER3Q86XQ3 398 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 PIGOQ8TEQ8 1089 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 SUSD6Q92537 303 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 CASD1Q96PB1 797 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 MAP7D2Q96T17 732 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
SS18L1-202ENST00000370848 TYW1Q9NV66 732 aaKnown RBP16.9■□□□□ 0.3
SS18L1-202ENST00000370848 TECTAO75443 2155 aa16.89■□□□□ 0.3
SS18L1-202ENST00000370848 STX6O43752 255 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 DKC1O60832 514 aaKnown RBP eCLIP16.89■□□□□ 0.29
SS18L1-202ENST00000370848 MAFO75444 373 aaPredicted RBP16.89■□□□□ 0.29
SS18L1-202ENST00000370848 LYPLA2O95372 231 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 DARSP14868 501 aaKnown RBP16.89■□□□□ 0.29
SS18L1-202ENST00000370848 ATF7P17544 494 aaPredicted RBP16.89■□□□□ 0.29
SS18L1-202ENST00000370848 NRIP1P48552 1158 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 NDUFV1P49821 464 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 NLRP11P59045 1033 aaKnown RBP16.89■□□□□ 0.29
SS18L1-202ENST00000370848 CDC42EP1Q00587 391 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 XKR9Q5GH70 373 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 LRRC55Q6ZSA7 311 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 EP400NLQ6ZTU2 488 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 BRAPQ7Z569 592 aa16.89■□□□□ 0.29
SS18L1-202ENST00000370848 A0A0U1RQF3 1178 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 EOMESO95936 686 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 FGFR1P11362 822 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 CDC25AP30304 524 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 PPM1AP35813 382 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 ERVFC1P60507 584 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 FOXD4L5Q5VV16 416 aaPredicted RBP16.88■□□□□ 0.29
SS18L1-202ENST00000370848 BMP8AQ7Z5Y6 402 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 ECHDC2Q86YB7 292 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 RNF135Q8IUD6 432 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 LRRC43Q8N309 656 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 IGSF22Q8N9C0 903 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 VN1R2Q8NFZ6 395 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 FOXD4L4Q8WXT5 416 aaPredicted RBP16.88■□□□□ 0.29
SS18L1-202ENST00000370848 MRPS27Q92552 414 aaKnown RBP16.88■□□□□ 0.29
SS18L1-202ENST00000370848 TMEM143Q96AN5 459 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 POLR3CQ9BUI4 534 aaPredicted RBP16.88■□□□□ 0.29
SS18L1-202ENST00000370848 IGFLR1Q9H665 355 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 XPNPEP1Q9NQW7 623 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 HCSTQ9UBK5 93 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 LRWD1Q9UFC0 647 aa16.88■□□□□ 0.29
SS18L1-202ENST00000370848 LAD1O00515 517 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
SS18L1-202ENST00000370848 CCT6AP40227 531 aaKnown RBP16.87■□□□□ 0.29
SS18L1-202ENST00000370848 PRPHP41219 470 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 RARRES1P49788 294 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 POLGP54098 1239 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-202ENST00000370848 EMC2Q15006 297 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 SF3A1Q15459 793 aaKnown RBP16.87■□□□□ 0.29
SS18L1-202ENST00000370848 CLUL1Q15846 466 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 DTHD1Q6ZMT9 781 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 DHX33Q9H6R0 707 aaKnown RBP16.87■□□□□ 0.29
SS18L1-202ENST00000370848 TLE6Q9H808 572 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 TUFT1Q9NNX1 390 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 CHST12Q9NRB3 414 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 SUCLA2Q9P2R7 463 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-202ENST00000370848 USP15Q9Y4E8 981 aaPredicted RBP16.87■□□□□ 0.29
SS18L1-202ENST00000370848 PCDHGC5Q9Y5F6 944 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 CLIC4Q9Y696 253 aa16.87■□□□□ 0.29
SS18L1-202ENST00000370848 VWA3AA6NCI4 1184 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 CSDE1O75534 798 aaKnown RBP16.86■□□□□ 0.29
SS18L1-202ENST00000370848 FGFR4P22455 802 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 RPA1P27694 616 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 GRIN1Q05586 938 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 PKP1Q13835 747 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 CLLU1OSQ5K130 101 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 OTUD6AQ7L8S5 288 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 ERMNQ8TAM6 284 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 SNX29Q8TEQ0 813 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 EDAQ92838 391 aa16.86■□□□□ 0.29
SS18L1-202ENST00000370848 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
SS18L1-202ENST00000370848 PHF7Q9BWX1 381 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms