RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SEL1LQ9UBV2 794 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 DIAPH2O60879 1101 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 PDCD2Q16342 344 aaPredicted RBP18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 ZBED8Q8IZ13 594 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 CYFIP2Q96F07 1278 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 NGRNQ9NPE2 291 aaKnown RBP18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 USP15Q9Y4E8 981 aaPredicted RBP18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 PRELPP51888 382 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 PDIA2Q13087 525 aaKnown RBP18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 STAT4Q14765 748 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 HP1BP3Q5SSJ5 553 aaPredicted RBP18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 PADI6Q6TGC4 694 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 PASD1Q8IV76 773 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 CEP95Q96GE4 821 aa18.28■□□□□ 0.52
PTP4A1-201ENST00000370651 XPOTO43592 962 aaKnown RBP18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 FAM107AO95990 144 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 OR2W6PQ8NHA6 318 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 TRIM51Q9BSJ1 452 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 KITP10721 976 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 KRT17Q04695 432 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 DCAF4Q8WV16 495 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 PSAPP07602 524 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 EEF1DP29692 281 aaKnown RBP18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 RBM43Q6ZSC3 357 aaKnown RBP18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 PPM1NQ8N819 430 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 ATP11CQ8NB49 1132 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.52
PTP4A1-201ENST00000370651 LPXNO60711 386 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 OATP04181 439 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 TRIM49P0CI25 452 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 TRIM49CP0CI26 452 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 HSPA8P11142 646 aaKnown RBP18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 ANTXR2P58335 489 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 CDO1Q16878 200 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 FAM160B2Q86V87 743 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 RHOT1Q8IXI2 618 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 FGD4Q96M96 766 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 SENP1Q9P0U3 644 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 LCMT1Q9UIC8 334 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 A2ML1A8K2U0 1454 aa18.27■□□□□ 0.51
PTP4A1-201ENST00000370651 CALB1P05937 261 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 EIF2AK2P19525 551 aaKnown RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 CCND2P30279 289 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 OSTNP61366 133 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 PLCB4Q15147 1175 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 RNF169Q8NCN4 708 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 HEXIM2Q96MH2 286 aaKnown RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 OLFM3Q96PB7 478 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 CSADQ9Y600 493 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 RAD51CO43502 376 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 LDHAP00338 332 aaKnown RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 ANXA13P27216 316 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 HNRNPH1P31943 449 aaKnown RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 NOP14P78316 857 aaKnown RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 STK4Q13043 487 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 ZNF394Q53GI3 561 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 ELOA2Q8IYF1 753 aaPredicted RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 C7orf25Q9BPX7 421 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 SUFUQ9UMX1 484 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 NUB1Q9Y5A7 615 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 TMEM270Q6UE05 265 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 BZW1Q7L1Q6 419 aaKnown RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 FOXP4Q8IVH2 680 aaPredicted RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 ATP6V1E2Q96A05 226 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 SH3GL3Q99963 347 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 GOLGA8CPA6NN73 597 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 USP17L10C9JJH3 530 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 OCRLQ01968 901 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 GRAPQ13588 217 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 TRMT10CQ7L0Y3 403 aaKnown RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 GRAPLQ8TC17 118 aaPredicted RBP18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 APOL6Q9BWW8 343 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 MINPP1Q9UNW1 487 aa18.26■□□□□ 0.51
PTP4A1-201ENST00000370651 GRM1Q13255 1194 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 PTGISQ16647 500 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 ANO5Q75V66 913 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 SNX25Q9H3E2 840 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 SPDYE16A6NNV3 312 aaPredicted RBP18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 AP5Z1O43299 807 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 PDIA5Q14554 519 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 KIF22Q14807 665 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 PPP6R3Q5H9R7 873 aaPredicted RBP18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 WDR93Q6P2C0 686 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 DBNDD1Q9H9R9 158 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 KIAA1586Q9HCI6 787 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 TMEM94Q12767 1356 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 PDXKO00764 312 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 TAF1BQ53T94 588 aaPredicted RBP18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 TRPM8Q7Z2W7 1104 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 STAMBPL1Q96FJ0 436 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 S100BP04271 92 aaPredicted RBP18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 PDXDC2PQ6P474 469 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 LRRC31Q6UY01 552 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 GIMAP8Q8ND71 665 aaPredicted RBP18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 AGPAT1Q99943 283 aa18.25■□□□□ 0.51
PTP4A1-201ENST00000370651 SERPINB2P05120 415 aa18.24■□□□□ 0.51
PTP4A1-201ENST00000370651 STAT3P40763 770 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms