RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 NFRKBQ6P4R8 1299 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 SLC8A2Q9UPR5 921 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 PNMA6AP0CW24 399 aaPredicted RBP20.99■□□□□ 0.95
LMO4-202ENST00000370544 SOX5P35711 763 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 ENOSF1Q7L5Y1 443 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 KLHL29Q96CT2 875 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 IP6K2Q9UHH9 426 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 RRP15Q9Y3B9 282 aaKnown RBP20.99■□□□□ 0.95
LMO4-202ENST00000370544 NPHP3-ACAD11A0A0J9YXS1 232 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 KRT37O76014 449 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 SDC4P31431 198 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 KLC3Q6P597 504 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 PDXDC1Q6P996 788 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 TUBB6Q9BUF5 446 aa20.99■□□□□ 0.95
LMO4-202ENST00000370544 JPH1Q9HDC5 661 aaPredicted RBP20.99■□□□□ 0.95
LMO4-202ENST00000370544 CHGBP05060 677 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 GCOM2Q9BZD3 368 aaPredicted RBP20.98■□□□□ 0.95
LMO4-202ENST00000370544 DONSONQ9NYP3 566 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 AGO2Q9UKV8 859 aaKnown RBP20.98■□□□□ 0.95
LMO4-202ENST00000370544 NOC2LQ9Y3T9 749 aaKnown RBP20.98■□□□□ 0.95
LMO4-202ENST00000370544 HEY1Q9Y5J3 304 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 CLGNO14967 610 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 RNF25Q96BH1 459 aaPredicted RBP20.98■□□□□ 0.95
LMO4-202ENST00000370544 FAM205CA6NFA0 338 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 NTSR2O95665 410 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 PSMC1P62191 440 aaKnown RBP20.98■□□□□ 0.95
LMO4-202ENST00000370544 SCN4BQ8IWT1 228 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 GRID2IPA4D2P6 1211 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 ASB14A6NK59 587 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 PDXKO00764 312 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 PAMP19021 973 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 MAP2K2P36507 400 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 ZNF211Q13398 564 aaPredicted RBP20.98■□□□□ 0.95
LMO4-202ENST00000370544 CCSER1Q9C0I3 900 aa20.98■□□□□ 0.95
LMO4-202ENST00000370544 CAV1Q03135 178 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 PDCD7Q8N8D1 485 aaKnown RBP20.97■□□□□ 0.95
LMO4-202ENST00000370544 PDZD8Q8NEN9 1154 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 CHMP6Q96FZ7 201 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 RGL1Q9NZL6 768 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 BNIP3LO60238 219 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 AP3M2P53677 418 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 FASTKD5Q7L8L6 764 aaKnown RBP20.97■□□□□ 0.95
LMO4-202ENST00000370544 MICALL2Q8IY33 904 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 CDC42EP5Q6NZY7 148 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 MAML1Q92585 1016 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 TRIM9Q9C026 710 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 FAM217BQ9NTX9 383 aaPredicted RBP20.97■□□□□ 0.95
LMO4-202ENST00000370544 NMT1P30419 496 aaKnown RBP20.97■□□□□ 0.95
LMO4-202ENST00000370544 C16orf86Q6ZW13 317 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 TTC39CQ8N584 583 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 FBXL13Q8NEE6 735 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 CPS1P31327 1500 aa20.97■□□□□ 0.95
LMO4-202ENST00000370544 SPDYE2BA6NHP3 402 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 SPDYE6P0CI01 402 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 TAF1BQ53T94 588 aaPredicted RBP20.96■□□□□ 0.95
LMO4-202ENST00000370544 NYAP2Q9P242 653 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 TMTC4Q5T4D3 741 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.96■□□□□ 0.95
LMO4-202ENST00000370544 CAPN11Q9UMQ6 739 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 LUC7L3O95232 432 aaKnown RBP20.96■□□□□ 0.95
LMO4-202ENST00000370544 NDUFB10O96000 172 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 NCF2P19878 526 aaPredicted RBP20.96■□□□□ 0.95
LMO4-202ENST00000370544 GLYCTKQ8IVS8 523 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 MORC4Q8TE76 937 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 SPDL1Q96EA4 605 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 VPS39Q96JC1 886 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 EPB41L4AQ9HCS5 686 aaPredicted RBP20.96■□□□□ 0.95
LMO4-202ENST00000370544 CYP26B1Q9NR63 512 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 PCSK1NQ9UHG2 260 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 SLC16A3O15427 465 aaKnown RBP20.96■□□□□ 0.95
LMO4-202ENST00000370544 HHIPL2Q6UWX4 724 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 TRIM72Q6ZMU5 477 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 URGCPQ8TCY9 931 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 KDM6AO15550 1401 aaPredicted RBP20.96■□□□□ 0.95
LMO4-202ENST00000370544 CD163L1Q9NR16 1453 aa20.96■□□□□ 0.95
LMO4-202ENST00000370544 PDS5AQ29RF7 1337 aaKnown RBP20.96■□□□□ 0.95
LMO4-202ENST00000370544 USP27XA6NNY8 438 aa20.95■□□□□ 0.95
LMO4-202ENST00000370544 ENTPD3O75355 529 aa20.95■□□□□ 0.95
LMO4-202ENST00000370544 PPARGP37231 505 aaPredicted RBP20.95■□□□□ 0.95
LMO4-202ENST00000370544 KCNV1Q6PIU1 500 aa20.95■□□□□ 0.95
LMO4-202ENST00000370544 SRRM1Q8IYB3 904 aaKnown RBP20.95■□□□□ 0.95
LMO4-202ENST00000370544 MARCH10Q8NA82 808 aaPredicted RBP20.95■□□□□ 0.95
LMO4-202ENST00000370544 STAP1Q9ULZ2 295 aa20.95■□□□□ 0.95
LMO4-202ENST00000370544 NOP9Q86U38 636 aaKnown RBP20.95■□□□□ 0.94
LMO4-202ENST00000370544 COPEO14579 308 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 IL1RL1Q01638 556 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 TIPINQ9BVW5 301 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 WNT8AQ9H1J5 351 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 CREB3O43889 395 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 EFNA5P52803 228 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 ANKRD20A4Q4UJ75 823 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 ANKRD20A8PQ5CZ79 823 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 ANKRD20A2Q5SQ80 823 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 ANKRD20A1Q5TYW2 823 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 TRIM67Q6ZTA4 783 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 PPWD1Q96BP3 646 aaKnown RBP20.95■□□□□ 0.94
LMO4-202ENST00000370544 G3BP2Q9UN86 482 aaKnown RBP20.95■□□□□ 0.94
LMO4-202ENST00000370544 POLR1AO95602 1720 aaPredicted RBP20.95■□□□□ 0.94
LMO4-202ENST00000370544 GOLGA8MH3BSY2 632 aa20.95■□□□□ 0.94
LMO4-202ENST00000370544 KRT7P08729 469 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms