RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MBTD1Q05BQ5 628 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 POU5F1BQ06416 359 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 MAPK7Q13164 816 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 NAALADL2Q58DX5 795 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 CDCA2Q69YH5 1023 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-204ENST00000370496 SV2BQ7L1I2 683 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-204ENST00000370496 DAW1Q8N136 415 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 KIFC3Q9BVG8 833 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 ZHX3Q9H4I2 956 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 AGPAT5Q9NUQ2 364 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 DACT1Q9NYF0 836 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 MSRAQ9UJ68 235 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 ODF2LQ9ULJ1 636 aa16.39■□□□□ 0.21
COL9A1-204ENST00000370496 LAMA2P24043 3122 aaKnown RBP16.39■□□□□ 0.21
COL9A1-204ENST00000370496 ENPP3O14638 875 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 FAM13AO94988 1023 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 GJB5O95377 273 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 DNAJB2P25686 324 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PCBP1Q15365 356 aaKnown RBP eCLIP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 TMEM132AQ24JP5 1023 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 ADALQ6DHV7 355 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 TWF2Q6IBS0 349 aaKnown RBP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 IQUBQ8NA54 791 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 LRCH3Q96II8 777 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PYM1Q9BRP8 204 aaKnown RBP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PBX4Q9BYU1 374 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 CUEDC2Q9H467 287 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 C17orf75Q9HAS0 396 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 LRFN2Q9ULH4 789 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PHLPP2Q6ZVD8 1323 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 TTC3P53804 2025 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 GOLGA6L4A6NEF3 574 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 TSPAN1O60635 241 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 STAG3L1P0CL83 205 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PLS3P13797 630 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PFKFB1P16118 471 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PBX2P40425 430 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 NPTX2P47972 431 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 SARSP49591 514 aaKnown RBP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 NCBP1Q09161 790 aaKnown RBP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 DSC3Q14574 896 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 MAPK6Q16659 721 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 ARSHQ5FYA8 562 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 NPAS4Q8IUM7 802 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 YME1L1Q96TA2 773 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 TNMDQ9H2S6 317 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 KMT5AQ9NQR1 393 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 CHST12Q9NRB3 414 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 RGS18Q9NS28 235 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PRMT7Q9NVM4 692 aaPredicted RBP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
COL9A1-204ENST00000370496 KCNH3Q9ULD8 1083 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 PCDHA11Q9Y5I1 949 aa16.38■□□□□ 0.21
COL9A1-204ENST00000370496 ADGRA3Q8IWK6 1321 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 SFI1A8K8P3 1242 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 PRKCBP05771 671 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 FXR1P51114 621 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL9A1-204ENST00000370496 EFNA5P52803 228 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 E2F4Q16254 413 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 CSPP1Q1MSJ5 1256 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 SLC24A5Q71RS6 500 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 DYMQ7RTS9 669 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 RTN4RL1Q86UN2 441 aaPredicted RBP16.37■□□□□ 0.21
COL9A1-204ENST00000370496 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 FSIP1Q8NA03 581 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 RNF169Q8NCN4 708 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 MRPS27Q92552 414 aaKnown RBP16.37■□□□□ 0.21
COL9A1-204ENST00000370496 TOP1MTQ969P6 601 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 TIFAQ96CG3 184 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 PRIMPOLQ96LW4 560 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 MAGEF1Q9HAY2 307 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 PARVGQ9HBI0 331 aa16.37■□□□□ 0.21
COL9A1-204ENST00000370496 LARSQ9P2J5 1176 aaKnown RBP16.37■□□□□ 0.21
COL9A1-204ENST00000370496 COL4A6Q14031 1691 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 A0A1B0GVL5 298 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 C9IYK1 514 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 B4GALT5O43286 388 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 MYOGP15173 224 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 CMA1P23946 247 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 AXLP30530 894 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 RAB27AP51159 221 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 SMTNP53814 917 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 GIT2Q14161 759 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 PPP2R2DQ66LE6 453 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 NOTUMQ6P988 496 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 MYCT1Q8N699 235 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 DDX12PQ92771 950 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 CCDC51Q96ER9 411 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 CPB2Q96IY4 423 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 LRRC27Q9C0I9 530 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 NKX2-4Q9H2Z4 354 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 KCNG1Q9UIX4 513 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 YBX2Q9Y2T7 364 aaKnown RBP16.36■□□□□ 0.21
COL9A1-204ENST00000370496 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 CNTNAP2Q9UHC6 1331 aa16.36■□□□□ 0.21
COL9A1-204ENST00000370496 A0A1W2PQ27 194 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms