RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 STXBP2Q15833 593 aa11.8□□□□□ -0.52
COL11A1-203ENST00000370096 ASPRV1Q53RT3 343 aa11.8□□□□□ -0.52
COL11A1-203ENST00000370096 C1orf54Q8WWF1 131 aa11.8□□□□□ -0.52
COL11A1-203ENST00000370096 GREM2Q9H772 168 aa11.8□□□□□ -0.52
COL11A1-203ENST00000370096 C6orf203Q9P0P8 240 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-203ENST00000370096 HPCAL4Q9UM19 191 aa11.8□□□□□ -0.52
COL11A1-203ENST00000370096 CLCA2Q9UQC9 943 aa11.8□□□□□ -0.52
COL11A1-203ENST00000370096 UBE4BO95155 1302 aa11.8□□□□□ -0.52
COL11A1-203ENST00000370096 CHL1O00533 1208 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 SPDYAQ5MJ70 313 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 ZNF746Q6NUN9 644 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 AFG1LQ8WV93 481 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 TRIM45Q9H8W5 580 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 SYNGAP1Q96PV0 1343 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 CIITAP33076 1130 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 EIF4A1P60842 406 aaKnown RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 DCAF15Q66K64 600 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 THNSL1Q8IYQ7 743 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 PAIP2BQ9ULR5 123 aaKnown RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 DFFAO00273 331 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 BRIP1Q9BX63 1249 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 GEMIN8Q9NWZ8 242 aaKnown RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 STMN3Q9NZ72 180 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 PIK3C2GO75747 1445 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 ABCC4O15439 1325 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 LINC00854A0A1B0GVQ3 168 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 ATP9BO43861 1147 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 KCNA3P22001 575 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 GRK2P25098 689 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 FAM49AQ9H0Q0 323 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 DDX47Q9H0S4 455 aaKnown RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 LRRC53A6NM62 1247 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 TBC1D4O60343 1298 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 ENO3P13929 434 aaPredicted RBP11.79□□□□□ -0.52
COL11A1-203ENST00000370096 CCNE1P24864 410 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 PDXDC2PQ6P474 469 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 HDDC2Q7Z4H3 204 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 DYNLL2Q96FJ2 89 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 OSBPL9Q96SU4 736 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 MKL2Q9ULH7 1088 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 DYTNA2CJ06 578 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 IYDQ6PHW0 289 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 MIGA2Q7L4E1 593 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 HEATR4Q86WZ0 1026 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 RHOT2Q8IXI1 618 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 OSBPL10Q9BXB5 764 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 KLHL11Q9NVR0 708 aa11.79□□□□□ -0.52
COL11A1-203ENST00000370096 SPDYE5A6NIY4 337 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 STXBP3O00186 592 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 GSNP06396 782 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 SPDYE7PQ495Y7 208 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 TMEM270Q6UE05 265 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 HSPBP1Q9NZL4 362 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 AIPL1Q9NZN9 384 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-203ENST00000370096 FANCAO15360 1455 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 PRAG1Q86YV5 1406 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 LARGE1O95461 756 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 PSAPP07602 524 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 TCF3P15923 654 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 GPC5P78333 572 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 ANKRD40Q6AI12 368 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 ZNF668Q96K58 619 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-203ENST00000370096 CNBD2Q96M20 576 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 MAD2L2Q9UI95 211 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 SRPRBQ9Y5M8 271 aaKnown RBP11.78□□□□□ -0.52
COL11A1-203ENST00000370096 USP17L3A6NCW0 530 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 USP17L4A6NCW7 530 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 USP27XA6NNY8 438 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 K7ERI5 159 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 NFIBO00712 420 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 MYO1DO94832 1006 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 APBA3O96018 575 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 MYL3P08590 195 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 PWP1Q13610 501 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 SYDE2Q5VT97 1194 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 PPP1R2P3Q6NXS1 205 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 USP17L1Q7RTZ2 530 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 ASNSD1Q9NWL6 643 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 DIS3Q9Y2L1 958 aaKnown RBP11.78□□□□□ -0.52
COL11A1-203ENST00000370096 CCDC78A2IDD5 438 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 GCLMP48507 274 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 ROR1Q01973 937 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 KRT39Q6A163 491 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 ARHGEF25Q86VW2 580 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 CCDC103Q8IW40 242 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 OR6P1Q8NGX9 317 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 ZNF564Q8TBZ8 553 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-203ENST00000370096 COG1Q8WTW3 980 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 RNF26Q9BY78 433 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-203ENST00000370096 WDR11Q9BZH6 1224 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 MRC2Q9UBG0 1479 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
COL11A1-203ENST00000370096 CCDC81Q6ZN84 652 aa11.78□□□□□ -0.52
COL11A1-203ENST00000370096 RBM41Q96IZ5 413 aaKnown RBP11.78□□□□□ -0.52
COL11A1-203ENST00000370096 USP44Q9H0E7 712 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms