RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 FSIP1Q8NA03 581 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 VWCEQ96DN2 955 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 PRIMPOLQ96LW4 560 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 REEP2Q9BRK0 252 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 ZBED2Q9BTP6 218 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
SSR4-202ENST00000370085 ZHX3Q9H4I2 956 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 KMT5AQ9NQR1 393 aa15.2■□□□□ 0.02
SSR4-202ENST00000370085 PRMT7Q9NVM4 692 aaPredicted RBP15.2■□□□□ 0.02
SSR4-202ENST00000370085 PIN4Q9Y237 131 aaKnown RBP15.2■□□□□ 0.02
SSR4-202ENST00000370085 A0A1B0GVL5 298 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 K7ERI5 159 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 PFKFB1P16118 471 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 NAALADL2Q58DX5 795 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 ARSHQ5FYA8 562 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 CDCA2Q69YH5 1023 aaPredicted RBP15.19■□□□□ 0.02
SSR4-202ENST00000370085 SLC24A5Q71RS6 500 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 APBB1IPQ7Z5R6 666 aaPredicted RBP15.19■□□□□ 0.02
SSR4-202ENST00000370085 MYCT1Q8N699 235 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 SPIRE2Q8WWL2 714 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 DDX12PQ92771 950 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 CCDC51Q96ER9 411 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 CHAMP1Q96JM3 812 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 ADAM2Q99965 735 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 CXXC1Q9P0U4 656 aaPredicted RBP15.19■□□□□ 0.02
SSR4-202ENST00000370085 SEL1LQ9UBV2 794 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 MSRAQ9UJ68 235 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 LRFN2Q9ULH4 789 aa15.19■□□□□ 0.02
SSR4-202ENST00000370085 A0A087X0B3 334 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 ENPP3O14638 875 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 CSDE1O75534 798 aaKnown RBP15.18■□□□□ 0.02
SSR4-202ENST00000370085 SLFN14P0C7P3 912 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 GAP43P17677 238 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 NPTX2P47972 431 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 RAB27AP51159 221 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 SMAD3P84022 425 aaKnown RBP15.18■□□□□ 0.02
SSR4-202ENST00000370085 MBTD1Q05BQ5 628 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 STRN3Q13033 797 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 GIT2Q14161 759 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 RAB30Q15771 203 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 E2F4Q16254 413 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 TPRNQ4KMQ1 711 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 TWF2Q6IBS0 349 aaKnown RBP15.18■□□□□ 0.02
SSR4-202ENST00000370085 NOTUMQ6P988 496 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 CCDC65Q8IXS2 484 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 OSBPL7Q9BZF2 842 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 RGS18Q9NS28 235 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 AGPAT5Q9NUQ2 364 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 KBTBD4Q9NVX7 518 aa15.18■□□□□ 0.02
SSR4-202ENST00000370085 PRKCBP05771 671 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 MYL1P05976 194 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 IDEP14735 1019 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 FGFR4P22455 802 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 SARSP49591 514 aaKnown RBP15.17■□□□□ 0.02
SSR4-202ENST00000370085 ZNF131P52739 623 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 MAPK7Q13164 816 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 FAM187BQ17R55 369 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 HABP4Q5JVS0 413 aaKnown RBP15.17■□□□□ 0.02
SSR4-202ENST00000370085 KANK3Q6NY19 840 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 DYMQ7RTS9 669 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 NPAS4Q8IUM7 802 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 HERC6Q8IVU3 1022 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 FAM178BQ8IXR5 827 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 HACE1Q8IYU2 909 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 DAW1Q8N136 415 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
SSR4-202ENST00000370085 TRIM6Q9C030 488 aaPredicted RBP15.17■□□□□ 0.02
SSR4-202ENST00000370085 TMX1Q9H3N1 280 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 TMEM134Q9H6X4 195 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 HOOK1Q9UJC3 728 aaKnown RBP15.17■□□□□ 0.02
SSR4-202ENST00000370085 HPSEQ9Y251 543 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 PCDHB7Q9Y5E2 793 aa15.17■□□□□ 0.02
SSR4-202ENST00000370085 TTC3P53804 2025 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 NPHP3-ACAD11A0A0J9YXS1 232 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 FAM237AA0A1B0GTK4 181 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 MYMKA6NI61 221 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 SFI1A8K8P3 1242 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 GOLGA6L22H0YM25 854 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 ACKR2O00590 384 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 HOXA2O43364 376 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 TLL1O43897 1013 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 TRAK2O60296 914 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 UPP2O95045 317 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 LIG1P18858 919 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 NDUFA8P51970 172 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
SSR4-202ENST00000370085 PRPF4BQ13523 1007 aaKnown RBP15.16■□□□□ 0.02
SSR4-202ENST00000370085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
SSR4-202ENST00000370085 STXBP4Q6ZWJ1 553 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 CNNM3Q8NE01 707 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 LRRC15Q8TF66 581 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 RSPH1Q8WYR4 309 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 BSNDQ8WZ55 320 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 TOP1MTQ969P6 601 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 CCDC47Q96A33 483 aaKnown RBP15.16■□□□□ 0.02
SSR4-202ENST00000370085 YME1L1Q96TA2 773 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 ADPGKQ9BRR6 497 aa15.16■□□□□ 0.02
SSR4-202ENST00000370085 FZD8Q9H461 694 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms