RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 FITM2Q8N6M3 262 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-201ENST00000369407 ZNF483Q8TF39 744 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-201ENST00000369407 SLC20A1Q8WUM9 679 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 RUSC1Q9BVN2 902 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 ZCWPW1Q9H0M4 648 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 SLAIN2Q9P270 581 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 LAMB1P07942 1786 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 PPATQ06203 517 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 MESDQ14696 234 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 SEPT2Q15019 361 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 TRIP13Q15645 432 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-201ENST00000369407 PRR16Q569H4 304 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 CCDC137Q6PK04 289 aaKnown RBP13.26□□□□□ -0.29
PHGDH-201ENST00000369407 CCDC105Q8IYK2 499 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 CTTNBP2NLQ9P2B4 639 aa13.26□□□□□ -0.29
PHGDH-201ENST00000369407 ASTN1O14525 1302 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 AGTP01019 485 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 VCAM1P19320 739 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 TNFAIP3P21580 790 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 SOX5P35711 763 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 SLC8A3P57103 927 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 MPP2Q14168 576 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 NFIXQ14938 502 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 MAB21L3Q8N8X9 362 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 SLC30A5Q8TAD4 765 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 ARHGEF2Q92974 986 aaKnown RBP13.25□□□□□ -0.29
PHGDH-201ENST00000369407 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-201ENST00000369407 RTFDC1Q9BY42 306 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-201ENST00000369407 NSRP1Q9H0G5 558 aaKnown RBP13.25□□□□□ -0.29
PHGDH-201ENST00000369407 CFAP73A6NFT4 308 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 FERP16591 822 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 NMT1P30419 496 aaKnown RBP13.25□□□□□ -0.29
PHGDH-201ENST00000369407 PDE6CP51160 858 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 CYP2J2P51589 502 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 COPS2P61201 443 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 ADCY2Q08462 1091 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 CTTNQ14247 550 aaKnown RBP13.25□□□□□ -0.29
PHGDH-201ENST00000369407 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 CBWD3Q5JTY5 395 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 CBWD5Q5RIA9 395 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 CRELD2Q6UXH1 353 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-201ENST00000369407 FAM47EQ6ZV65 393 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 NBPF5PQ86XG9 351 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-201ENST00000369407 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 BHMT2Q9H2M3 363 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 ACP6Q9NPH0 428 aa13.25□□□□□ -0.29
PHGDH-201ENST00000369407 A0A0A6YYK5 440 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ZBTB39O15060 712 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 LGR5O75473 907 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 VPS41P49754 854 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ORC2Q13416 577 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 CAPRIN2Q6IMN6 1127 aaKnown RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 PIGOQ8TEQ8 1089 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 PAIP2Q9BPZ3 127 aaKnown RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ADAM22Q9P0K1 906 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 RASAL2Q9UJF2 1139 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 PFASO15067 1338 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 SCN7AQ01118 1682 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 UBAP1LF5GYI3 381 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 CALUO43852 315 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 MSH2P43246 934 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 COL23A1Q86Y22 540 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ZC3H3Q8IXZ2 948 aaKnown RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 CARD9Q9H257 536 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ZNF287Q9HBT7 754 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 PICK1Q9NRD5 415 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 SLC5A4Q9NY91 659 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 RGL1Q9NZL6 768 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 MTRF1LQ9UGC7 380 aaKnown RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 TRAF3IP3Q9Y228 551 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 TMEM253P0C7T8 217 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 PYGMP11217 842 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ABL2P42684 1182 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 RIPK1Q13546 671 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ANKRD20A2Q5SQ80 823 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ANKRD20A1Q5TYW2 823 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ANKRD20A3Q5VUR7 823 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 FOXR2Q6PJQ5 311 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 MXD3Q9BW11 206 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 ANKRD2Q9GZV1 360 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
PHGDH-201ENST00000369407 NKX1-2Q9UD57 310 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-201ENST00000369407 FAM187AA6NFU0 413 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 PHF2O75151 1096 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 SUN1O94901 812 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 MGAT5Q09328 741 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 PPP4R3CPQ6ZMV5 832 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 PRUNE1Q86TP1 453 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 FAM186BQ8IYM0 893 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 WDR66Q8TBY9 1149 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 C1orf54Q8WWF1 131 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 TMEM237Q96Q45 408 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 ZMYND8Q9ULU4 1186 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-201ENST00000369407 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
PHGDH-201ENST00000369407 PNMA6FA0A0J9YX94 578 aa13.23□□□□□ -0.29
PHGDH-201ENST00000369407 FOXN3O00409 490 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-201ENST00000369407 KIF3CO14782 793 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms