RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 PDXKO00764 312 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 CALUO43852 315 aaPredicted RBP18.8■□□□□ 0.6
CHTOP-203ENST00000368690 PHF2O75151 1096 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 GJB6O95452 261 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 BAG3O95817 575 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 STAT1P42224 750 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 PTGIRP43119 386 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 CCNHP51946 323 aaPredicted RBP18.8■□□□□ 0.6
CHTOP-203ENST00000368690 HADHBP55084 474 aaKnown RBP18.8■□□□□ 0.6
CHTOP-203ENST00000368690 KCNJ2P63252 427 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 GSTO1P78417 241 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 OLIG1Q8TAK6 271 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 SPDL1Q96EA4 605 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 SLC24A3Q9HC58 644 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 PPP1R9AQ9ULJ8 1098 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 SYNGAP1Q96PV0 1343 aa18.8■□□□□ 0.6
CHTOP-203ENST00000368690 RASGRF2O14827 1237 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 GGPS1O95749 300 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 RARGP13631 454 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 KNOP1Q1ED39 458 aaKnown RBP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 CAPRIN2Q6IMN6 1127 aaKnown RBP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 C16orf86Q6ZW13 317 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 ASRGL1Q7L266 308 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 SH3RF3Q8TEJ3 882 aaPredicted RBP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 ZNF483Q8TF39 744 aaPredicted RBP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 PCDHA12Q9UN75 941 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 IGF2BP3O00425 579 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 GCKP35557 465 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 CLK2P49760 499 aaKnown RBP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 AUHQ13825 339 aaKnown RBP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 BLMHQ13867 455 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 AOC3Q16853 763 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 SLC4A8Q2Y0W8 1093 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 MIS18BP1Q6P0N0 1132 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 EPM2AIP1Q7L775 607 aaPredicted RBP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 SLC44A5Q8NCS7 719 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 LNX1Q8TBB1 728 aaPredicted RBP18.79■□□□□ 0.6
CHTOP-203ENST00000368690 KLHL29Q96CT2 875 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 ARL2BPQ9Y2Y0 163 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 SNX24Q9Y343 169 aa18.79■□□□□ 0.6
CHTOP-203ENST00000368690 RIPK2O43353 540 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 DIAPH2O60879 1101 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 VCAM1P19320 739 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 RPL13P26373 211 aaKnown RBP18.78■□□□□ 0.6
CHTOP-203ENST00000368690 MKRN3Q13064 507 aaKnown RBP18.78■□□□□ 0.6
CHTOP-203ENST00000368690 KIRREL3Q8IZU9 778 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 C7orf43Q8WVR3 580 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 CTNNBL1Q8WYA6 563 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-203ENST00000368690 GLG1Q92896 1179 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 SYT11Q9BT88 431 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 RXFP1Q9HBX9 757 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 ERVK-5Q9HDB9 667 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 MIF4GDA9UHW6 222 aaKnown RBP18.78■□□□□ 0.6
CHTOP-203ENST00000368690 E9PMD0 336 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 ALAS1P13196 640 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 LACTBP83111 547 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-203ENST00000368690 BMT2Q1RMZ1 405 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 ASPRV1Q53RT3 343 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 DNAAF5Q86Y56 855 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 SAAL1Q96ER3 474 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 SEMA4AQ9H3S1 761 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 VAT1LQ9HCJ6 419 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 OSGEPQ9NPF4 335 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 SPATS2LQ9NUQ6 558 aaKnown RBP18.78■□□□□ 0.6
CHTOP-203ENST00000368690 KIAA1024Q9UPX6 916 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 PCDHA3Q9Y5H8 950 aa18.78■□□□□ 0.6
CHTOP-203ENST00000368690 KCNA3P22001 575 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 CTNNA2P26232 953 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 ATP5DP30049 168 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 SOX5P35711 763 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 MSH2P43246 934 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 CDK8P49336 464 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 SLC12A3P55017 1021 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 CCDC15Q0P6D6 951 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 TCEAL1Q15170 157 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 CHADLQ6NUI6 762 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 TEX9Q8N6V9 391 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 SLC35C1Q96A29 364 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 AJAP1Q9UKB5 411 aaPredicted RBP18.77■□□□□ 0.6
CHTOP-203ENST00000368690 UTRNP46939 3433 aa18.77■□□□□ 0.6
CHTOP-203ENST00000368690 DDX60LQ5H9U9 1706 aaKnown RBP18.77■□□□□ 0.59
CHTOP-203ENST00000368690 CCNB1P14635 433 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 ATP2A2P16615 1042 aaKnown RBP18.76■□□□□ 0.59
CHTOP-203ENST00000368690 ATP11AP98196 1134 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 CC2D2BQ6DHV5 1058 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 TRMT10CQ7L0Y3 403 aaKnown RBP18.76■□□□□ 0.59
CHTOP-203ENST00000368690 CYFIP1Q7L576 1253 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 SERPINB12Q96P63 405 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 DHX36Q9H2U1 1008 aaKnown RBP18.76■□□□□ 0.59
CHTOP-203ENST00000368690 TYW1Q9NV66 732 aaKnown RBP18.76■□□□□ 0.59
CHTOP-203ENST00000368690 GCNT4Q9P109 453 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 PRKAG3Q9UGI9 489 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 ECE2O60344 883 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 EVI5O60447 810 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 LDHCP07864 332 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 RPL21P46778 160 aaKnown RBP18.76■□□□□ 0.59
CHTOP-203ENST00000368690 TNNI2P48788 182 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 PRPF4BQ13523 1007 aaKnown RBP18.76■□□□□ 0.59
CHTOP-203ENST00000368690 ZNF568Q3ZCX4 644 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms