RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 CTDSPL2Q05D32 466 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 QRICH1Q2TAL8 776 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 PLA2G2CQ5R387 149 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 ZNF605Q86T29 641 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 ECHDC2Q86YB7 292 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 ZNF707Q96C28 371 aaPredicted RBP11.92□□□□□ -0.5
TUBE1-201ENST00000368657 ZBTB10Q96DT7 871 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 NT5C3AQ9H0P0 336 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 PLEKHA4Q9H4M7 779 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 CDH7Q9ULB5 785 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 TELO2Q9Y4R8 837 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 PCDHGA5Q9Y5G8 931 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 MYH15Q9Y2K3 1946 aa11.92□□□□□ -0.5
TUBE1-201ENST00000368657 GSTTP1A0A1W2PQM5 241 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 FAM221BA6H8Z2 402 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 OPLAHO14841 1288 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 EPN2O95208 641 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 ADH1AP07327 375 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 FGRP09769 529 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 FSHRP23945 695 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 MRPS9P82933 396 aaKnown RBP11.91□□□□□ -0.5
TUBE1-201ENST00000368657 SRSF5Q13243 272 aaKnown RBP11.91□□□□□ -0.5
TUBE1-201ENST00000368657 SEMA3FQ13275 785 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 CLLU1OSQ5K130 101 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 ZNF687Q8N1G0 1237 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 TMEM57Q8N5G2 664 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 KBTBD3Q8NAB2 608 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 ST13P5Q8NFI4 369 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-201ENST00000368657 TMEM40Q8WWA1 233 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 PIK3R5Q8WYR1 880 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 ADAMTS10Q9H324 1103 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 CPVLQ9H3G5 476 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 CDHR5Q9HBB8 845 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 VPS45Q9NRW7 570 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
TUBE1-201ENST00000368657 C4orf47A7E2U8 309 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 ZC3H11AO75152 810 aaKnown RBP eCLIP11.9□□□□□ -0.5
TUBE1-201ENST00000368657 RFPL2O75678 378 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 PAPSS2O95340 614 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-201ENST00000368657 GLUD1P00367 558 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 GALTP07902 379 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 PLA2G2AP14555 144 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 HOXA13P31271 388 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-201ENST00000368657 RDXP35241 583 aaKnown RBP11.9□□□□□ -0.5
TUBE1-201ENST00000368657 CRYBB1P53674 252 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-201ENST00000368657 CEP85Q6P2H3 762 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 CACNA2D4Q7Z3S7 1137 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 TMEM173Q86WV6 379 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-201ENST00000368657 HELQQ8TDG4 1101 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 PRKD2Q9BZL6 878 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 LMAN1LQ9HAT1 526 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 RTEL1Q9NZ71 1219 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 ANAPC4Q9UJX5 808 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
TUBE1-201ENST00000368657 TENM4Q6N022 2769 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 A0A0U1RQF3 1178 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-201ENST00000368657 M0R2C6 588 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 HYAL3O43820 417 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-201ENST00000368657 POLR2MP0CAP2 368 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 HOXA6P31267 233 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 SATB1Q01826 763 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 TRAF1Q13077 416 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 FAM228AQ86W67 206 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 SPEM1Q8N4L4 309 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 RNF169Q8NCN4 708 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 FRAT1Q92837 279 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-201ENST00000368657 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
TUBE1-201ENST00000368657 FREM2Q5SZK8 3169 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 SHISA7A6NL88 538 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
TUBE1-201ENST00000368657 RAB11FIP3O75154 756 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 KLRC1P26715 233 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 PLCB4Q15147 1175 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 NLRX1Q86UT6 975 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 WDR5BQ86VZ2 330 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 FCHSD1Q86WN1 690 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 KIAA0319LQ8IZA0 1049 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 HNRNPLLQ8WVV9 542 aaKnown RBP11.88□□□□□ -0.51
TUBE1-201ENST00000368657 LRIG1Q96JA1 1093 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 EDEM2Q9BV94 578 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 BCL11AQ9H165 835 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 AZI2Q9H6S1 392 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 JMJD4Q9H9V9 463 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 VAT1LQ9HCJ6 419 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 HEBP1Q9NRV9 189 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 TOMM22Q9NS69 142 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 KLK13Q9UKR3 277 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 NDRG2Q9UN36 371 aaKnown RBP11.88□□□□□ -0.51
TUBE1-201ENST00000368657 LAMA1P25391 3075 aa11.88□□□□□ -0.51
TUBE1-201ENST00000368657 DOCK5Q9H7D0 1870 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 H0Y626 953 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 ARHGAP6O43182 974 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 GAS2O43903 313 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms