RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 PAPLNO95428 1278 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 MYBP10242 640 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 PMLP29590 882 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 GPC5P78333 572 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 MLF2Q15773 248 aaPredicted RBP16.66■□□□□ 0.26
VAMP4-202ENST00000367740 RALGAPA1Q6GYQ0 2036 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
VAMP4-202ENST00000367740 LPPQ93052 612 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 RPP25Q9BUL9 199 aaKnown RBP16.66■□□□□ 0.26
VAMP4-202ENST00000367740 OSBPL6Q9BZF3 934 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 ZNF302Q9NR11 478 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 PRMT8Q9NR22 394 aaPredicted RBP16.66■□□□□ 0.26
VAMP4-202ENST00000367740 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.66■□□□□ 0.26
VAMP4-202ENST00000367740 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
VAMP4-202ENST00000367740 AKT3Q9Y243 479 aa16.66■□□□□ 0.26
VAMP4-202ENST00000367740 MEIS3P2A8K0S8 358 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 DDX39AO00148 427 aaKnown RBP16.65■□□□□ 0.26
VAMP4-202ENST00000367740 IFIT3O14879 490 aaKnown RBP16.65■□□□□ 0.26
VAMP4-202ENST00000367740 MAGEA9P43362 315 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 PHKA2P46019 1235 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 LONRF3Q496Y0 759 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 NOMO2Q5JPE7 1267 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 FGF14Q92915 247 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 LTB4R2Q9NPC1 389 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 MRPL17Q9NRX2 175 aaKnown RBP16.65■□□□□ 0.26
VAMP4-202ENST00000367740 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 INPP5FQ9Y2H2 1132 aa16.65■□□□□ 0.26
VAMP4-202ENST00000367740 SETXQ7Z333 2677 aaKnown RBP16.65■□□□□ 0.26
VAMP4-202ENST00000367740 FAM170BA6NMN3 283 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 C2CD2LO14523 706 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 GLUD1P00367 558 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 DARSP14868 501 aaKnown RBP16.64■□□□□ 0.25
VAMP4-202ENST00000367740 SHC2P98077 582 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 PRKCQQ04759 706 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 RNASELQ05823 741 aaKnown RBP16.64■□□□□ 0.25
VAMP4-202ENST00000367740 LPAL2Q16609 132 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 GLB1LQ6UWU2 654 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 ZNF280BQ86YH2 543 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 LRRC71Q8N4P6 559 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 MAP7D2Q96T17 732 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 STK39Q9UEW8 545 aa16.64■□□□□ 0.25
VAMP4-202ENST00000367740 TEX28O15482 410 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 ADH1AP07327 375 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 CD72P21854 359 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 KIF5BP33176 963 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 GPC3P51654 580 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 CEP55Q53EZ4 464 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 SWSAP1Q6NVH7 229 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 PARM1Q6UWI2 310 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 RPS6KC1Q96S38 1066 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 TRAIPQ9BWF2 469 aa16.63■□□□□ 0.25
VAMP4-202ENST00000367740 NBEAQ8NFP9 2946 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 ERICH2A1L162 156 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 CSDE1O75534 798 aaKnown RBP16.62■□□□□ 0.25
VAMP4-202ENST00000367740 OFD1O75665 1012 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 PLEKHA8P1O95397 391 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 URODP06132 367 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 TARSP26639 723 aaKnown RBP16.62■□□□□ 0.25
VAMP4-202ENST00000367740 AK2P54819 239 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 SLC44A4Q53GD3 710 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 LAIR1Q6GTX8 287 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 EFCAB12Q6NXP0 572 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 ELMSAN1Q6PJG2 1045 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 TRMT1LQ7Z2T5 733 aaKnown RBP16.62■□□□□ 0.25
VAMP4-202ENST00000367740 CATIPQ7Z7H3 387 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 CKAP2LQ8IYA6 745 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 COL26A1Q96A83 441 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 CLDN23Q96B33 292 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 NT5C3AQ9H0P0 336 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 PIDD1Q9HB75 910 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 ZBTB47Q9UFB7 747 aaPredicted RBP16.62■□□□□ 0.25
VAMP4-202ENST00000367740 DPP7Q9UHL4 492 aa16.62■□□□□ 0.25
VAMP4-202ENST00000367740 MAFBQ9Y5Q3 323 aaPredicted RBP16.62■□□□□ 0.25
VAMP4-202ENST00000367740 IGF2RP11717 2491 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 MEIS1O00470 390 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 MAGEB2O15479 319 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 GDF9O60383 454 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 LRP3O75074 770 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 DDHD2O94830 711 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 SOD2P04179 222 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 PROS1P07225 676 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 SPATA31D3P0C874 917 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 TDGF1P13385 188 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 SMARCA1P28370 1054 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 N4BP2L1Q5TBK1 243 aaPredicted RBP16.61■□□□□ 0.25
VAMP4-202ENST00000367740 MIS18BP1Q6P0N0 1132 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 RSPO2Q6UXX9 243 aaPredicted RBP16.61■□□□□ 0.25
VAMP4-202ENST00000367740 PRR23CQ6ZRP0 262 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 SPATA31D4Q6ZUB0 917 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 ZNF710Q8N1W2 664 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 HERC2P3Q9BVR0 1158 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 FAM126AQ9BYI3 521 aaPredicted RBP16.61■□□□□ 0.25
VAMP4-202ENST00000367740 LY9Q9HBG7 655 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 SEMA4GQ9NTN9 838 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms