RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CCNT1O60563 726 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 EGFRP00533 1210 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 RAPGEF1Q13905 1077 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 ATL3Q6DD88 541 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 C17orf53Q8N3J3 647 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 HDDC3Q8N4P3 179 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 CEP170P1Q96L14 293 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 EFHD1Q9BUP0 239 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 SLC38A7Q9NVC3 462 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 IP6K2Q9UHH9 426 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 ZBTB1Q9Y2K1 713 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 EFCAB8A8MWE9 144 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 RPS6KA5O75582 802 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 TTC4O95801 387 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 CYP2E1P05181 493 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 RRM1P23921 792 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 PPARDQ03181 441 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 TBL3Q12788 808 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 TFCP2Q12800 502 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 IFT88Q13099 833 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 IQCB1Q15051 598 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 HDDC2Q7Z4H3 204 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 APPL2Q8NEU8 664 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 LZICQ8WZA0 190 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 SHDQ96IW2 340 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 CCT7Q99832 543 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 TEX12Q9BXU0 123 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 MMADHCQ9H3L0 296 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 SYNGAP1Q96PV0 1343 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 SYCE1LA8MT33 242 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 AXIN1O15169 862 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 MAGEB2O15479 319 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 LDHAP00338 332 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 PDXDC1Q6P996 788 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 LPAR1Q92633 364 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 INTS4Q96HW7 963 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 ACTR5Q9H9F9 607 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 MRPL44Q9H9J2 332 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 RNF146Q9NTX7 359 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 KLHL42Q9P2K6 505 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 SRP68Q9UHB9 627 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 ATP6V1HQ9UI12 483 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 UBE2Q2LH0YL09 131 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 TADA3O75528 432 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 GRK2P25098 689 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 KIAA1755Q5JYT7 1200 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 ZC3H14Q6PJT7 736 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 TEKT4Q8WW24 435 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 CCDC124Q96CT7 223 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 NUP58Q9BVL2 599 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 MRPL9Q9BYD2 267 aaKnown RBP9.2□□□□□ -0.94
SYNE1-206ENST00000367253 ABCG4Q9H172 646 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 VPS37BQ9H9H4 285 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 ATPIF1Q9UII2 106 aa9.2□□□□□ -0.94
SYNE1-206ENST00000367253 ATP6V1G1O75348 118 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 PRLP01236 227 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 TXKP42681 527 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 ZNF445P59923 1031 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 IKBKEQ14164 716 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 BTG3Q14201 252 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-206ENST00000367253 ITIH5Q86UX2 942 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 PASD1Q8IV76 773 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 ZKSCAN4Q969J2 545 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-206ENST00000367253 MCCC1Q96RQ3 725 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-206ENST00000367253 TSSK1BQ9BXA7 367 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 RGL1Q9NZL6 768 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 COL4A3BPQ9Y5P4 624 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 STAM2O75886 525 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 MAGEA1P43355 309 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 AK2P54819 239 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 BRAPQ7Z569 592 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 CTU1Q7Z7A3 348 aaKnown RBP9.19□□□□□ -0.94
SYNE1-206ENST00000367253 ARHGEF25Q86VW2 580 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 RIN2Q8WYP3 895 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-206ENST00000367253 HIC2Q96JB3 615 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 ZNF577Q9BSK1 485 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 CHMP1AQ9HD42 196 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-206ENST00000367253 ASAP1Q9ULH1 1129 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 CHMP2BQ9UQN3 213 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 DDAH1O94760 285 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 FANCCQ00597 558 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 PTH1RQ03431 593 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 RPS6KA1Q15418 735 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 STRIP1Q5VSL9 837 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 KRT80Q6KB66 452 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 RSBN1LQ6PCB5 846 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-206ENST00000367253 PPP4R3CPQ6ZMV5 832 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 SRLQ86TD4 932 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 CCHCR1Q8TD31 782 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 KCNV2Q8TDN2 545 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 AFG1LQ8WV93 481 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 KLHL29Q96CT2 875 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 GDAP1L1Q96MZ0 367 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 RPAP3Q9H6T3 665 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-206ENST00000367253 BATF3Q9NR55 127 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 INTUQ9ULD6 942 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 MYPNQ86TC9 1320 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 RPTORQ8N122 1335 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 ADCY3O60266 1144 aa9.19□□□□□ -0.94
SYNE1-206ENST00000367253 TBC1D12O60347 775 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms