RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 CDC25AP30304 524 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 PHKA2P46019 1235 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 GPC3P51654 580 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 PKP1Q13835 747 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
PRKN-203ENST00000366894 FAM102BQ5T8I3 360 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 ADALQ6DHV7 355 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
PRKN-203ENST00000366894 CRIPAKQ8N1N5 446 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 IQUBQ8NA54 791 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 OSMRQ99650 979 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 ZBED2Q9BTP6 218 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
PRKN-203ENST00000366894 C2orf40Q9H1Z8 148 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 CERS4Q9HA82 394 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 CHST12Q9NRB3 414 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 DACT1Q9NYF0 836 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 COG5Q9UP83 839 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 MTCH2Q9Y6C9 303 aa17.11■□□□□ 0.33
PRKN-203ENST00000366894 COL4A6Q14031 1691 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 H0YCG3 227 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
PRKN-203ENST00000366894 SSBP05455 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
PRKN-203ENST00000366894 PLA2G4BP0C869 781 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 SMTNP53814 917 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 LAMTOR4Q0VGL1 99 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 NFX1Q12986 1120 aaKnown RBP17.1■□□□□ 0.33
PRKN-203ENST00000366894 SV2BQ7L1I2 683 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 FAM228AQ86W67 206 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 ZBTB8OSQ8IWT0 167 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 SP7Q8TDD2 431 aaPredicted RBP17.1■□□□□ 0.33
PRKN-203ENST00000366894 TMEM143Q96AN5 459 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
PRKN-203ENST00000366894 RBM19Q9Y4C8 960 aaKnown RBP17.1■□□□□ 0.33
PRKN-203ENST00000366894 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
PRKN-203ENST00000366894 PRRC2BQ5JSZ5 2229 aaKnown RBP17.1■□□□□ 0.33
PRKN-203ENST00000366894 TTC3P53804 2025 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 LINC01553A4QN01 128 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 PP2D1A8MPX8 630 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 E9PMD0 336 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 MGEA5O60502 916 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 UPP2O95045 317 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 KRT18P05783 430 aaKnown RBP17.09■□□□□ 0.33
PRKN-203ENST00000366894 STAG3L1P0CL83 205 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 SRGAP2CP0DJJ0 459 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 DARSP14868 501 aaKnown RBP17.09■□□□□ 0.33
PRKN-203ENST00000366894 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
PRKN-203ENST00000366894 ARL2P36404 184 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 EFNA5P52803 228 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 TMEM119Q4V9L6 283 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 ZNF668Q96K58 619 aaPredicted RBP17.09■□□□□ 0.33
PRKN-203ENST00000366894 NLRP4Q96MN2 994 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 IPO9Q96P70 1041 aaKnown RBP17.09■□□□□ 0.33
PRKN-203ENST00000366894 MAGEF1Q9HAY2 307 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 RC3H2Q9HBD1 1191 aaKnown RBP17.09■□□□□ 0.33
PRKN-203ENST00000366894 C1orf112Q9NSG2 853 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 LARSQ9P2J5 1176 aaKnown RBP17.09■□□□□ 0.33
PRKN-203ENST00000366894 USP25Q9UHP3 1055 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 ST3GAL5Q9UNP4 418 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 INSL6Q9Y581 213 aa17.09■□□□□ 0.33
PRKN-203ENST00000366894 ARID2Q68CP9 1835 aa17.08■□□□□ 0.33
PRKN-203ENST00000366894 GUCY2CP25092 1073 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 AXLP30530 894 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 STAT6P42226 847 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 RINT1Q6NUQ1 792 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 APBB1IPQ7Z5R6 666 aaPredicted RBP17.08■□□□□ 0.32
PRKN-203ENST00000366894 RNF149Q8NC42 400 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 RSPH1Q8WYR4 309 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 LARP4BQ92615 738 aaKnown RBP17.08■□□□□ 0.32
PRKN-203ENST00000366894 EPSTI1Q96J88 318 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 CLIC6Q96NY7 704 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 ODF2LQ9ULJ1 636 aa17.08■□□□□ 0.32
PRKN-203ENST00000366894 A0A087WZ62 844 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 ERLIN2O94905 339 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 PLCG1P19174 1290 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 CMA1P23946 247 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 NAMPTP43490 491 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 ERVK-21P61565 698 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 DMP1Q13316 513 aaPredicted RBP17.07■□□□□ 0.32
PRKN-203ENST00000366894 GRB10Q13322 594 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 KARSQ15046 597 aaKnown RBP17.07■□□□□ 0.32
PRKN-203ENST00000366894 ECM1Q16610 540 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 TMEM31Q5JXX7 168 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 C1orf186Q6ZWK4 172 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 DEPTORQ8TB45 409 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 LEO1Q8WVC0 666 aaPredicted RBP17.07■□□□□ 0.32
PRKN-203ENST00000366894 ARNTL2Q8WYA1 636 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 RAD54LQ92698 747 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 HLA-CQ95604 372 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 PNMA5Q96PV4 448 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 FDXACB1Q9BRP7 624 aaPredicted RBP17.07■□□□□ 0.32
PRKN-203ENST00000366894 LRFN3Q9BTN0 628 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 POLR3FQ9H1D9 316 aaPredicted RBP17.07■□□□□ 0.32
PRKN-203ENST00000366894 PCDHA7Q9UN72 937 aa17.07■□□□□ 0.32
PRKN-203ENST00000366894 A0A087WWV3 80 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 LPXNO60711 386 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 PTENP60484 403 aa17.06■□□□□ 0.32
PRKN-203ENST00000366894 DSC3Q14574 896 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms