RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 SF3B3Q15393 1217 aaKnown RBP9.28□□□□□ -0.92
H3F3A-201ENST00000366813 ADAT2Q7Z6V5 191 aaKnown RBP9.28□□□□□ -0.92
H3F3A-201ENST00000366813 ZNF669Q96BR6 464 aaPredicted RBP9.28□□□□□ -0.92
H3F3A-201ENST00000366813 FCRL3Q96P31 734 aaPredicted RBP9.28□□□□□ -0.92
H3F3A-201ENST00000366813 GABRQQ9UN88 632 aa9.28□□□□□ -0.92
H3F3A-201ENST00000366813 DIS3Q9Y2L1 958 aaKnown RBP9.28□□□□□ -0.92
H3F3A-201ENST00000366813 PCDHA5Q9Y5H7 936 aa9.28□□□□□ -0.92
H3F3A-201ENST00000366813 PCDHAC2Q9Y5I4 1007 aa9.28□□□□□ -0.92
H3F3A-201ENST00000366813 FGF10O15520 208 aaPredicted RBP9.27□□□□□ -0.93
H3F3A-201ENST00000366813 FOXD2O60548 495 aaPredicted RBP9.27□□□□□ -0.93
H3F3A-201ENST00000366813 PPM1BO75688 479 aa9.27□□□□□ -0.93
H3F3A-201ENST00000366813 CD3EP07766 207 aa9.27□□□□□ -0.93
H3F3A-201ENST00000366813 MSL3P1P0C860 447 aa9.27□□□□□ -0.93
H3F3A-201ENST00000366813 IFRD2Q12894 506 aaPredicted RBP9.27□□□□□ -0.93
H3F3A-201ENST00000366813 PPP2R5DQ14738 602 aa9.27□□□□□ -0.93
H3F3A-201ENST00000366813 MTERF2Q49AM1 385 aa9.27□□□□□ -0.93
H3F3A-201ENST00000366813 PAQR3Q6TCH7 311 aa9.27□□□□□ -0.93
H3F3A-201ENST00000366813 ZDHHC15Q96MV8 337 aa9.27□□□□□ -0.93
H3F3A-201ENST00000366813 TTYH1Q9H313 450 aaPredicted RBP9.27□□□□□ -0.93
H3F3A-201ENST00000366813 PDLIM7Q9NR12 457 aa9.27□□□□□ -0.93
H3F3A-201ENST00000366813 DBR1Q9UK59 544 aaKnown RBP9.27□□□□□ -0.93
H3F3A-201ENST00000366813 BDP1A6H8Y1 2624 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 FAM205AQ6ZU69 1335 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 MUC6Q6W4X9 2439 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 COL2A1P02458 1487 aaPredicted RBP9.26□□□□□ -0.93
H3F3A-201ENST00000366813 PSME4Q14997 1843 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 A0A0G2JLL6 359 aaPredicted RBP9.26□□□□□ -0.93
H3F3A-201ENST00000366813 CLRN2A0PK11 232 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 ADCY3O60266 1144 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 ANXA1P04083 346 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 CYBBP04839 570 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 TAF7Q15545 349 aaPredicted RBP9.26□□□□□ -0.93
H3F3A-201ENST00000366813 TARBP2Q15633 366 aaKnown RBP9.26□□□□□ -0.93
H3F3A-201ENST00000366813 PLEKHN1Q494U1 663 aaPredicted RBP9.26□□□□□ -0.93
H3F3A-201ENST00000366813 SV2CQ496J9 727 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 SPATC1Q76KD6 591 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 RTF1Q92541 710 aaKnown RBP9.26□□□□□ -0.93
H3F3A-201ENST00000366813 FAM89AQ96GI7 184 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 RCC1LQ96I51 464 aaKnown RBP9.26□□□□□ -0.93
H3F3A-201ENST00000366813 PTCHD1Q96NR3 888 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 DNAJC7Q99615 494 aa9.26□□□□□ -0.93
H3F3A-201ENST00000366813 AOX1Q06278 1338 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 COL1A1P02452 1464 aaPredicted RBP9.25□□□□□ -0.93
H3F3A-201ENST00000366813 ZNF200P98182 395 aaPredicted RBP9.25□□□□□ -0.93
H3F3A-201ENST00000366813 VGLL4Q14135 290 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 DLGAP5Q15398 846 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 STRIP1Q5VSL9 837 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 ZDHHC14Q8IZN3 488 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 ARHGEF39Q8N4T4 335 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 ADCY4Q8NFM4 1077 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 UHRF1Q96T88 793 aaPredicted RBP9.25□□□□□ -0.93
H3F3A-201ENST00000366813 C1QTNF1Q9BXJ1 281 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 SUGT1Q9Y2Z0 365 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 PPP2R3BQ9Y5P8 575 aa9.25□□□□□ -0.93
H3F3A-201ENST00000366813 ZNF804BA4D1E1 1349 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 MYO3BQ8WXR4 1341 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 OTOL1A6NHN0 477 aaPredicted RBP9.24□□□□□ -0.93
H3F3A-201ENST00000366813 F8W031 263 aaPredicted RBP9.24□□□□□ -0.93
H3F3A-201ENST00000366813 CETPP11597 493 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 IFNGR1P15260 489 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 PRKAR2BP31323 418 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 AIMP1Q12904 312 aaKnown RBP9.24□□□□□ -0.93
H3F3A-201ENST00000366813 PROSER3Q2NL68 480 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 GIMAP6Q6P9H5 292 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 BVESQ8NE79 360 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 FEZF2Q8TBJ5 459 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 LRFN3Q9BTN0 628 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 XYLT2Q9H1B5 865 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 C11orf49Q9H6J7 331 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 VEZTQ9HBM0 779 aa9.24□□□□□ -0.93
H3F3A-201ENST00000366813 ADGRA2Q96PE1 1338 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 DBHP09172 617 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 CAPN2P17655 700 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 TACR1P25103 407 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 L1CAMP32004 1257 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 FLT3LGP49771 235 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 EIF4A1P60842 406 aaKnown RBP9.23□□□□□ -0.93
H3F3A-201ENST00000366813 HSP90AB3PQ58FF7 597 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 TTLL5Q6EMB2 1281 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 LINC01356Q8N9X3 169 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 SGSM3Q96HU1 749 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 ASB2Q96Q27 587 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 ZCCHC17Q9NP64 241 aaKnown RBP9.23□□□□□ -0.93
H3F3A-201ENST00000366813 CGGBP1Q9UFW8 167 aaPredicted RBP9.23□□□□□ -0.93
H3F3A-201ENST00000366813 PFDN2Q9UHV9 154 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 AKT3Q9Y243 479 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 EMC9Q9Y3B6 208 aa9.23□□□□□ -0.93
H3F3A-201ENST00000366813 AGRPO00253 132 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 ITGAVP06756 1048 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 SSRP1Q08945 709 aaKnown RBP9.22□□□□□ -0.93
H3F3A-201ENST00000366813 ERICH6BQ5W0A0 696 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 COPS6Q7L5N1 327 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 ZNF227Q86WZ6 799 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 LILRB2Q8N423 598 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 PPM1EQ8WY54 764 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 PPP1R14AQ96A00 147 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 PRMT6Q96LA8 375 aaPredicted RBP9.22□□□□□ -0.93
H3F3A-201ENST00000366813 MRGPRX3Q96LB0 322 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 LGR4Q9BXB1 951 aa9.22□□□□□ -0.93
H3F3A-201ENST00000366813 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms